Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Cdc40Q9DC48 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Cdc40Q9DC48 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Cdc40Q9DC48 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Cdc40Q9DC48 Gm26249-201ENSMUST00000116708 118 ntBASIC1.44□□□□□ -2.18
Cdc40Q9DC48 Gm25541-201ENSMUST00000116888 126 ntBASIC1.44□□□□□ -2.18
Cdc40Q9DC48 Gm13457-201ENSMUST00000117885 267 ntBASIC1.44□□□□□ -2.18
Cdc40Q9DC48 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Cdc40Q9DC48 Gm24438-201ENSMUST00000157893 115 ntBASIC1.44□□□□□ -2.18
Cdc40Q9DC48 Gm27957-201ENSMUST00000184054 127 ntBASIC1.44□□□□□ -2.18
Cdc40Q9DC48 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.44□□□□□ -2.18
Cdc40Q9DC48 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Cdc40Q9DC48 Gm34073-201ENSMUST00000195736 212 ntBASIC1.44□□□□□ -2.18
Cdc40Q9DC48 Gm33866-201ENSMUST00000196911 289 ntBASIC1.44□□□□□ -2.18
Cdc40Q9DC48 Gm43578-201ENSMUST00000201250 459 ntBASIC1.44□□□□□ -2.18
Cdc40Q9DC48 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Cdc40Q9DC48 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Cdc40Q9DC48 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm24079-201ENSMUST00000104352 132 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm16242-201ENSMUST00000117741 334 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm13720-201ENSMUST00000120741 196 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm6025-201ENSMUST00000121517 201 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm12770-201ENSMUST00000121734 462 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm24598-201ENSMUST00000122510 74 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm25559-201ENSMUST00000157182 74 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm23411-201ENSMUST00000157988 62 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm25730-201ENSMUST00000178753 165 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm23379-201ENSMUST00000180026 107 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm27248-201ENSMUST00000184004 166 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm24150-201ENSMUST00000082759 104 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm23462-201ENSMUST00000083264 104 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Mir340-201ENSMUST00000083483 98 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm26108-201ENSMUST00000083973 191 ntBASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.43□□□□□ -2.18
Cdc40Q9DC48 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Gm24172-201ENSMUST00000104127 117 ntBASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Gm25059-201ENSMUST00000157367 117 ntBASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Gm24174-201ENSMUST00000158933 111 ntBASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Gm25936-201ENSMUST00000179952 114 ntBASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Gm27660-201ENSMUST00000184028 208 ntBASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Gm29352-201ENSMUST00000188054 544 ntBASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Gm37658-201ENSMUST00000192672 315 ntBASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Mir320-201ENSMUST00000083594 82 ntBASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.42□□□□□ -2.18
Cdc40Q9DC48 Gm6956-201ENSMUST00000134724 546 ntBASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Gm22315-201ENSMUST00000158010 143 ntBASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Gm18588-201ENSMUST00000177308 492 ntBASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Gm26501-201ENSMUST00000178307 107 ntBASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Mir7683-201ENSMUST00000183842 61 ntBASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Gm27817-201ENSMUST00000184302 233 ntBASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Gm27919-201ENSMUST00000185163 107 ntBASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Gm28453-203ENSMUST00000187041 189 ntBASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.41□□□□□ -2.18
Cdc40Q9DC48 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Gm43739-201ENSMUST00000198294 307 ntBASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Gm44962-201ENSMUST00000206460 279 ntBASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Gm45375-201ENSMUST00000210338 280 ntBASIC1.41□□□□□ -2.18
Cdc40Q9DC48 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Gm23515-201ENSMUST00000082829 107 ntBASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Cdc40Q9DC48 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.4□□□□□ -2.18
Cdc40Q9DC48 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Cdc40Q9DC48 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Gm24896-201ENSMUST00000122741 135 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Gm24481-201ENSMUST00000157210 102 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Gm24480-201ENSMUST00000157442 103 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Gm23558-201ENSMUST00000157823 80 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Gm24677-201ENSMUST00000158755 150 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Gm25958-201ENSMUST00000175114 71 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Gm20613-201ENSMUST00000175828 345 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Gm29603-201ENSMUST00000186792 334 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Gm43914-201ENSMUST00000203592 594 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Gm44446-201ENSMUST00000204864 255 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC1.4□□□□□ -2.19
Cdc40Q9DC48 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 AC166358.10-201ENSMUST00000220556 144 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Gm25589-201ENSMUST00000082502 166 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Gm24623-201ENSMUST00000082616 194 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Gm25859-201ENSMUST00000083710 91 ntBASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Cdc40Q9DC48 Gm15010-201ENSMUST00000117153 407 ntBASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.39□□□□□ -2.19
Cdc40Q9DC48 Gm26149-201ENSMUST00000157432 108 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms