Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm44910-201ENSMUST00000208451 396 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm25589-201ENSMUST00000082502 166 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm26228-201ENSMUST00000082512 107 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm25080-201ENSMUST00000082526 107 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm22572-201ENSMUST00000082985 105 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm25518-201ENSMUST00000083864 107 ntBASIC1.15□□□□□ -2.23
Ccdc3Q9D6Y1 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Gm15861-201ENSMUST00000120979 339 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Gm12779-201ENSMUST00000121496 143 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Gm14366-201ENSMUST00000121970 730 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Gm24892-201ENSMUST00000122747 104 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Gm23858-201ENSMUST00000158384 106 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Gm23352-201ENSMUST00000158428 64 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Gm22136-201ENSMUST00000158751 268 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Gm18417-201ENSMUST00000176564 648 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Gm27517-201ENSMUST00000184347 236 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Gm29397-201ENSMUST00000185205 333 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Gm37709-201ENSMUST00000195074 600 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Gm44490-201ENSMUST00000198566 127 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Gm42774-201ENSMUST00000198854 283 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Mir1291-201ENSMUST00000199842 117 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Gm22980-201ENSMUST00000082608 70 ntBASIC1.14□□□□□ -2.23
Ccdc3Q9D6Y1 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Gm24229-201ENSMUST00000158830 118 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Gm22565-201ENSMUST00000175540 69 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Gm24862-201ENSMUST00000179103 79 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Gm23310-201ENSMUST00000179105 79 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Gm25461-201ENSMUST00000179293 79 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Mir6419-201ENSMUST00000184784 113 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Gm43739-201ENSMUST00000198294 307 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Gm44449-201ENSMUST00000203610 153 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Gm44870-201ENSMUST00000207291 357 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Gm45207-201ENSMUST00000207469 145 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Gm44655-201ENSMUST00000207768 423 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Gm44654-201ENSMUST00000208052 329 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Snora3-201ENSMUST00000083082 132 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Ccdc3Q9D6Y1 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm13804-201ENSMUST00000119552 172 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm11606-201ENSMUST00000120706 617 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm12639-201ENSMUST00000121400 493 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm24630-201ENSMUST00000122768 106 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm23000-201ENSMUST00000157083 139 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm25715-201ENSMUST00000158627 125 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm23339-201ENSMUST00000158962 139 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm25956-201ENSMUST00000175115 217 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Mir6985-201ENSMUST00000184641 61 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm29134-201ENSMUST00000186579 126 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm28337-201ENSMUST00000190425 666 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm37923-201ENSMUST00000191624 161 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm31123-201ENSMUST00000192094 666 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm9402-201ENSMUST00000196849 388 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm18546-201ENSMUST00000197245 676 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Gm23245-201ENSMUST00000083370 135 ntBASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.12□□□□□ -2.23
Ccdc3Q9D6Y1 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm24342-201ENSMUST00000103907 104 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm13672-201ENSMUST00000117554 459 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm22485-201ENSMUST00000157990 109 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm23025-201ENSMUST00000158769 111 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm20438-201ENSMUST00000174441 329 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm23090-201ENSMUST00000177331 78 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm22510-201ENSMUST00000179304 79 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm26336-201ENSMUST00000179449 79 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm26390-201ENSMUST00000179628 79 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm27490-201ENSMUST00000184754 128 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm28926-201ENSMUST00000191063 680 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Gm17906-201ENSMUST00000202480 901 ntBASIC1.11□□□□□ -2.23
Ccdc3Q9D6Y1 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 264.9 ms