Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm22364-201ENSMUST00000083097 98 ntBASIC2.29□□□□□ -2.04
Vps28Q9D1C8 Gm24661-201ENSMUST00000083205 104 ntBASIC2.29□□□□□ -2.04
Vps28Q9D1C8 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Vps28Q9D1C8 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Gm23551-201ENSMUST00000116852 121 ntBASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Gm11420-201ENSMUST00000120047 402 ntBASIC2.28□□□□□ -2.04
Vps28Q9D1C8 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Gm25115-201ENSMUST00000157187 140 ntBASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Gm25910-201ENSMUST00000157620 140 ntBASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Gm16038-201ENSMUST00000159317 193 ntBASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Gm29005-201ENSMUST00000186773 320 ntBASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Gm44010-201ENSMUST00000204432 331 ntBASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Gm25788-201ENSMUST00000082721 131 ntBASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Gm24044-201ENSMUST00000083107 156 ntBASIC2.28□□□□□ -2.04
Vps28Q9D1C8 Mir300-201ENSMUST00000083485 79 ntBASIC2.28□□□□□ -2.04
Vps28Q9D1C8 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Vps28Q9D1C8 Gm16510-201ENSMUST00000153501 249 ntBASIC2.27□□□□□ -2.05
Vps28Q9D1C8 Gm26157-201ENSMUST00000158974 126 ntBASIC2.27□□□□□ -2.05
Vps28Q9D1C8 Gm20613-201ENSMUST00000175828 345 ntBASIC2.27□□□□□ -2.05
Vps28Q9D1C8 Gm29604-201ENSMUST00000187176 163 ntBASIC2.27□□□□□ -2.05
Vps28Q9D1C8 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.27□□□□□ -2.05
Vps28Q9D1C8 Mir378a-201ENSMUST00000198300 66 ntBASIC2.27□□□□□ -2.05
Vps28Q9D1C8 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.27□□□□□ -2.05
Vps28Q9D1C8 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.27□□□□□ -2.05
Vps28Q9D1C8 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.27□□□□□ -2.05
Vps28Q9D1C8 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.27□□□□□ -2.05
Vps28Q9D1C8 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.27□□□□□ -2.05
Vps28Q9D1C8 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.27□□□□□ -2.05
Vps28Q9D1C8 Gm23404-201ENSMUST00000082543 97 ntBASIC2.27□□□□□ -2.05
Vps28Q9D1C8 Gm25796-201ENSMUST00000082645 163 ntBASIC2.27□□□□□ -2.05
Vps28Q9D1C8 Gm25130-201ENSMUST00000082650 156 ntBASIC2.27□□□□□ -2.05
Vps28Q9D1C8 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Vps28Q9D1C8 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.27□□□□□ -2.05
Vps28Q9D1C8 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.27□□□□□ -2.05
Vps28Q9D1C8 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Gm24598-201ENSMUST00000122510 74 ntBASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Gm23435-201ENSMUST00000157183 156 ntBASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Gm23120-201ENSMUST00000157654 287 ntBASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Gm28058-201ENSMUST00000186421 264 ntBASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Gm20257-202ENSMUST00000188643 130 ntBASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Gm43587-201ENSMUST00000199590 204 ntBASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Gm44083-201ENSMUST00000203114 337 ntBASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Gm43976-201ENSMUST00000203637 235 ntBASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Gm44687-201ENSMUST00000204975 235 ntBASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Gm44811-201ENSMUST00000209120 228 ntBASIC2.26□□□□□ -2.05
Vps28Q9D1C8 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.26□□□□□ -2.05
Vps28Q9D1C8 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.26□□□□□ -2.05
Vps28Q9D1C8 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Gm25929-201ENSMUST00000082784 107 ntBASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
Vps28Q9D1C8 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Mir344e-201ENSMUST00000104677 66 ntBASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Mir872-201ENSMUST00000104728 81 ntBASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Gm15215-201ENSMUST00000117773 489 ntBASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Gm14980-201ENSMUST00000121247 736 ntBASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Gm15536-201ENSMUST00000121411 114 ntBASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Gm11254-201ENSMUST00000122368 653 ntBASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Gm22080-201ENSMUST00000157591 106 ntBASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Gm24348-201ENSMUST00000158710 130 ntBASIC2.25□□□□□ -2.05
Vps28Q9D1C8 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Gm26968-201ENSMUST00000182894 481 ntBASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Gm10264-201ENSMUST00000220589 429 ntBASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.25□□□□□ -2.05
Vps28Q9D1C8 Gm26249-201ENSMUST00000116708 118 ntBASIC2.24□□□□□ -2.05
Vps28Q9D1C8 Gm14906-201ENSMUST00000119265 390 ntBASIC2.24□□□□□ -2.05
Vps28Q9D1C8 Gm12721-201ENSMUST00000120621 268 ntBASIC2.24□□□□□ -2.05
Vps28Q9D1C8 Gm12926-201ENSMUST00000121158 409 ntBASIC2.24□□□□□ -2.05
Vps28Q9D1C8 Gm24900-201ENSMUST00000158128 134 ntBASIC2.24□□□□□ -2.05
Vps28Q9D1C8 Gm22159-201ENSMUST00000158412 130 ntBASIC2.24□□□□□ -2.05
Vps28Q9D1C8 Gm24308-201ENSMUST00000177773 114 ntBASIC2.24□□□□□ -2.05
Vps28Q9D1C8 Gm24487-201ENSMUST00000178017 63 ntBASIC2.24□□□□□ -2.05
Vps28Q9D1C8 Gm24799-201ENSMUST00000178431 79 ntBASIC2.24□□□□□ -2.05
Vps28Q9D1C8 Gm23793-201ENSMUST00000179396 117 ntBASIC2.24□□□□□ -2.05
Vps28Q9D1C8 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC2.24□□□□□ -2.05
Vps28Q9D1C8 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.24□□□□□ -2.05
Vps28Q9D1C8 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC2.24□□□□□ -2.05
Vps28Q9D1C8 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.24□□□□□ -2.05
Vps28Q9D1C8 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.24□□□□□ -2.05
Vps28Q9D1C8 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.24□□□□□ -2.05
Vps28Q9D1C8 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
Vps28Q9D1C8 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Vps28Q9D1C8 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Vps28Q9D1C8 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Vps28Q9D1C8 Gm12351-201ENSMUST00000118727 292 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms