Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Mir466k-201ENSMUST00000116774 122 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Gm14894-201ENSMUST00000117170 270 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Gm9059-201ENSMUST00000118319 183 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Gm23600-201ENSMUST00000157260 71 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Gm24436-201ENSMUST00000157889 302 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Gm27640-201ENSMUST00000184580 147 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Gm29167-201ENSMUST00000190024 377 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Gm37449-201ENSMUST00000193016 270 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Gm18658-201ENSMUST00000195558 270 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Gm44482-201ENSMUST00000199232 103 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Gm44419-201ENSMUST00000203338 229 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Gm45452-201ENSMUST00000210905 177 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Gm19572-201ENSMUST00000214326 338 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Snord104-201ENSMUST00000083192 70 ntBASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Khdc3Q9CWU5 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.4□□□□□ -2.02
Khdc3Q9CWU5 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Khdc3Q9CWU5 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 Gm25115-201ENSMUST00000157187 140 ntBASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 Gm23860-201ENSMUST00000179446 132 ntBASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 Gm27878-201ENSMUST00000184000 106 ntBASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 Gm37377-201ENSMUST00000191733 304 ntBASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 Mir1291-201ENSMUST00000199842 117 ntBASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 Snora34-201ENSMUST00000083402 138 ntBASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 Mir32-201ENSMUST00000083610 70 ntBASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 Gm26111-201ENSMUST00000083969 106 ntBASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Khdc3Q9CWU5 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.39□□□□□ -2.03
Khdc3Q9CWU5 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Khdc3Q9CWU5 Gm24670-201ENSMUST00000104154 132 ntBASIC2.39□□□□□ -2.03
Khdc3Q9CWU5 Gm26249-201ENSMUST00000116708 118 ntBASIC2.39□□□□□ -2.03
Khdc3Q9CWU5 Gm25153-201ENSMUST00000157118 156 ntBASIC2.39□□□□□ -2.03
Khdc3Q9CWU5 Gm23033-201ENSMUST00000157996 134 ntBASIC2.39□□□□□ -2.03
Khdc3Q9CWU5 Gm28008-201ENSMUST00000184021 186 ntBASIC2.39□□□□□ -2.03
Khdc3Q9CWU5 Gm36891-201ENSMUST00000191995 655 ntBASIC2.39□□□□□ -2.03
Khdc3Q9CWU5 Gm44468-201ENSMUST00000199516 105 ntBASIC2.39□□□□□ -2.03
Khdc3Q9CWU5 Gm44858-201ENSMUST00000207360 154 ntBASIC2.39□□□□□ -2.03
Khdc3Q9CWU5 Gm25512-201ENSMUST00000083863 107 ntBASIC2.39□□□□□ -2.03
Khdc3Q9CWU5 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.39□□□□□ -2.03
Khdc3Q9CWU5 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.38□□□□□ -2.03
Khdc3Q9CWU5 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Khdc3Q9CWU5 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Khdc3Q9CWU5 Gm6829-201ENSMUST00000119858 360 ntBASIC2.38□□□□□ -2.03
Khdc3Q9CWU5 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Khdc3Q9CWU5 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Khdc3Q9CWU5 Gm37713-201ENSMUST00000191746 198 ntBASIC2.38□□□□□ -2.03
Khdc3Q9CWU5 Gm7214-201ENSMUST00000222428 272 ntBASIC2.38□□□□□ -2.03
Khdc3Q9CWU5 Gm22154-201ENSMUST00000083844 131 ntBASIC2.38□□□□□ -2.03
Khdc3Q9CWU5 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
Khdc3Q9CWU5 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Mir682-201ENSMUST00000102281 96 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Snora36b-201ENSMUST00000104383 132 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Mir669i-201ENSMUST00000117007 127 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Gm14748-201ENSMUST00000119819 411 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Gm25066-201ENSMUST00000158145 123 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Gm25253-201ENSMUST00000179958 107 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Gm28408-201ENSMUST00000191557 463 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Gm19901-201ENSMUST00000192191 495 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Ighv1-28-201ENSMUST00000192987 351 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Gm43250-201ENSMUST00000196536 273 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Mir7661-201ENSMUST00000197023 61 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Gm42672-201ENSMUST00000197821 352 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 AC116460.1-201ENSMUST00000219040 313 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Gm23625-201ENSMUST00000082457 100 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Gm24977-201ENSMUST00000083106 163 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Gm23851-201ENSMUST00000083831 103 ntBASIC2.37□□□□□ -2.03
Khdc3Q9CWU5 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Khdc3Q9CWU5 Gm22782-201ENSMUST00000104082 132 ntBASIC2.36□□□□□ -2.03
Khdc3Q9CWU5 Gm15526-201ENSMUST00000112504 204 ntBASIC2.36□□□□□ -2.03
Khdc3Q9CWU5 Mir1b-201ENSMUST00000117012 122 ntBASIC2.36□□□□□ -2.03
Khdc3Q9CWU5 Gm12647-201ENSMUST00000118977 265 ntBASIC2.36□□□□□ -2.03
Khdc3Q9CWU5 Gm25805-201ENSMUST00000122788 108 ntBASIC2.36□□□□□ -2.03
Khdc3Q9CWU5 Gm23232-201ENSMUST00000157300 105 ntBASIC2.36□□□□□ -2.03
Khdc3Q9CWU5 Gm24691-201ENSMUST00000157762 140 ntBASIC2.36□□□□□ -2.03
Khdc3Q9CWU5 Gm23858-201ENSMUST00000158384 106 ntBASIC2.36□□□□□ -2.03
Khdc3Q9CWU5 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.36□□□□□ -2.03
Khdc3Q9CWU5 Mir5624-201ENSMUST00000176635 61 ntBASIC2.36□□□□□ -2.03
Khdc3Q9CWU5 Gm26265-202ENSMUST00000196326 133 ntBASIC2.36□□□□□ -2.03
Khdc3Q9CWU5 Mir93-201ENSMUST00000083593 88 ntBASIC2.36□□□□□ -2.03
Khdc3Q9CWU5 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Khdc3Q9CWU5 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Khdc3Q9CWU5 Gm22193-201ENSMUST00000116868 76 ntBASIC2.35□□□□□ -2.03
Khdc3Q9CWU5 Gm6574-201ENSMUST00000120037 362 ntBASIC2.35□□□□□ -2.03
Khdc3Q9CWU5 Gm22554-201ENSMUST00000157798 147 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 147.5 ms