Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 Gm28995-201ENSMUST00000186625 261 ntBASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 Gm28951-201ENSMUST00000190742 313 ntBASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 Gm37338-201ENSMUST00000191986 127 ntBASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 Gm44966-201ENSMUST00000208096 157 ntBASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 Gm24313-201ENSMUST00000082561 133 ntBASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 Gm22062-201ENSMUST00000082563 107 ntBASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 Gm25628-201ENSMUST00000084002 105 ntBASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Ddx28Q9CWT6 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 Gm24075-201ENSMUST00000158175 72 ntBASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 Gm24210-201ENSMUST00000158263 133 ntBASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 Gm24348-201ENSMUST00000158710 130 ntBASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 Gm28257-201ENSMUST00000185244 463 ntBASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 Gm28579-201ENSMUST00000186143 369 ntBASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 Gm44858-201ENSMUST00000207360 154 ntBASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 Gm44909-201ENSMUST00000208756 165 ntBASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.17□□□□□ -2.06
Ddx28Q9CWT6 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Gm22674-201ENSMUST00000104413 131 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Gm23803-201ENSMUST00000104610 132 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Mir872-201ENSMUST00000104728 81 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Gm13756-201ENSMUST00000117618 222 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Gm23469-201ENSMUST00000157131 104 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Gm23381-201ENSMUST00000157676 94 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Gm25012-201ENSMUST00000158396 164 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Mir3075-201ENSMUST00000175340 85 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Gm24308-201ENSMUST00000177773 114 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Gm28008-201ENSMUST00000184021 186 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Gm28900-201ENSMUST00000185232 156 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Gm28627-201ENSMUST00000186141 453 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Gm45207-201ENSMUST00000207469 145 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Gm23625-201ENSMUST00000082457 100 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Gm22978-201ENSMUST00000082607 160 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Mir181a-2-201ENSMUST00000083489 76 ntBASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Ddx28Q9CWT6 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.15□□□□□ -2.06
Ddx28Q9CWT6 Gm14894-201ENSMUST00000117170 270 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Gm14298-201ENSMUST00000139032 237 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Gm16356-201ENSMUST00000143300 169 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Gm26280-201ENSMUST00000157096 101 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Gm22447-201ENSMUST00000158155 92 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Gm22945-201ENSMUST00000158557 157 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Gm23921-201ENSMUST00000175258 107 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Gm28408-201ENSMUST00000191557 463 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Gm37449-201ENSMUST00000193016 270 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Gm18658-201ENSMUST00000195558 270 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Gm44419-201ENSMUST00000203338 229 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Gm43978-201ENSMUST00000203491 451 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Gm44161-201ENSMUST00000203532 253 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Gm44182-201ENSMUST00000204052 115 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Gm45344-201ENSMUST00000211610 341 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Ddx28Q9CWT6 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Gm26249-201ENSMUST00000116708 118 ntBASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Gm22713-201ENSMUST00000116895 130 ntBASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Gm13885-201ENSMUST00000117569 187 ntBASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Gm12235-201ENSMUST00000118596 170 ntBASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Gm22479-201ENSMUST00000122566 81 ntBASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Gm2830-201ENSMUST00000140330 385 ntBASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Gm25866-201ENSMUST00000158245 112 ntBASIC2.14□□□□□ -2.07
Ddx28Q9CWT6 Gm22517-201ENSMUST00000158265 136 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 112.2 ms