Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm26194-201ENSMUST00000175036 71 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Mir3086-201ENSMUST00000175072 87 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Gm26501-201ENSMUST00000178307 107 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Mir6379-201ENSMUST00000183392 115 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Mir6355-201ENSMUST00000183687 106 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Mir7678-201ENSMUST00000185076 71 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Gm28740-201ENSMUST00000186142 215 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Gm43583-201ENSMUST00000199235 303 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Gm17990-201ENSMUST00000211728 553 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Gm24037-201ENSMUST00000082871 180 ntBASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Smc1aQ9CU62 Gm13432-201ENSMUST00000118861 241 ntBASIC2.03□□□□□ -2.08
Smc1aQ9CU62 Gm23172-201ENSMUST00000157160 124 ntBASIC2.03□□□□□ -2.08
Smc1aQ9CU62 Mir195b-201ENSMUST00000184814 97 ntBASIC2.03□□□□□ -2.08
Smc1aQ9CU62 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.03□□□□□ -2.08
Smc1aQ9CU62 Gm44881-201ENSMUST00000205425 367 ntBASIC2.03□□□□□ -2.08
Smc1aQ9CU62 Gm20102-201ENSMUST00000222445 220 ntBASIC2.03□□□□□ -2.08
Smc1aQ9CU62 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Smc1aQ9CU62 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Smc1aQ9CU62 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Smc1aQ9CU62 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.03□□□□□ -2.08
Smc1aQ9CU62 Gm37096-201ENSMUST00000192317 2058 ntBASIC2.03□□□□□ -2.08
Smc1aQ9CU62 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Smc1aQ9CU62 Mir301b-201ENSMUST00000102333 97 ntBASIC2.02□□□□□ -2.09
Smc1aQ9CU62 Gm6806-201ENSMUST00000120092 1006 ntBASIC2.02□□□□□ -2.09
Smc1aQ9CU62 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Smc1aQ9CU62 Gm22328-201ENSMUST00000158074 112 ntBASIC2.02□□□□□ -2.09
Smc1aQ9CU62 Gm24656-201ENSMUST00000177548 132 ntBASIC2.02□□□□□ -2.09
Smc1aQ9CU62 Mir7679-201ENSMUST00000183379 63 ntBASIC2.02□□□□□ -2.09
Smc1aQ9CU62 Gm37162-201ENSMUST00000191708 551 ntBASIC2.02□□□□□ -2.09
Smc1aQ9CU62 Gm32175-201ENSMUST00000193641 346 ntBASIC2.02□□□□□ -2.09
Smc1aQ9CU62 Gm34073-201ENSMUST00000195736 212 ntBASIC2.02□□□□□ -2.09
Smc1aQ9CU62 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Smc1aQ9CU62 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC2.02□□□□□ -2.09
Smc1aQ9CU62 Gm2829-201ENSMUST00000213121 499 ntBASIC2.02□□□□□ -2.09
Smc1aQ9CU62 Gm22683-201ENSMUST00000082854 137 ntBASIC2.02□□□□□ -2.09
Smc1aQ9CU62 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.02□□□□□ -2.09
Smc1aQ9CU62 Gm11512-201ENSMUST00000119669 663 ntBASIC2.01□□□□□ -2.09
Smc1aQ9CU62 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC2.01□□□□□ -2.09
Smc1aQ9CU62 Gm25115-201ENSMUST00000157187 140 ntBASIC2.01□□□□□ -2.09
Smc1aQ9CU62 Igkv17-134-201ENSMUST00000168310 348 ntBASIC2.01□□□□□ -2.09
Smc1aQ9CU62 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.01□□□□□ -2.09
Smc1aQ9CU62 Gm24084-201ENSMUST00000175173 137 ntBASIC2.01□□□□□ -2.09
Smc1aQ9CU62 Gm43367-201ENSMUST00000199986 625 ntBASIC2.01□□□□□ -2.09
Smc1aQ9CU62 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.01□□□□□ -2.09
Smc1aQ9CU62 Gm23462-201ENSMUST00000083264 104 ntBASIC2.01□□□□□ -2.09
Smc1aQ9CU62 Mir410-201ENSMUST00000083563 81 ntBASIC2.01□□□□□ -2.09
Smc1aQ9CU62 Gm38388-201ENSMUST00000195569 1430 ntBASIC2□□□□□ -2.09
Smc1aQ9CU62 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Smc1aQ9CU62 Mir3096-201ENSMUST00000116685 71 ntBASIC2□□□□□ -2.09
Smc1aQ9CU62 Gm23983-201ENSMUST00000157142 114 ntBASIC2□□□□□ -2.09
Smc1aQ9CU62 Gm24481-201ENSMUST00000157210 102 ntBASIC2□□□□□ -2.09
Smc1aQ9CU62 Gm25051-201ENSMUST00000158602 249 ntBASIC2□□□□□ -2.09
Smc1aQ9CU62 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Smc1aQ9CU62 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2□□□□□ -2.09
Smc1aQ9CU62 Gm43739-201ENSMUST00000198294 307 ntBASIC2□□□□□ -2.09
Smc1aQ9CU62 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2□□□□□ -2.09
Smc1aQ9CU62 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2□□□□□ -2.09
Smc1aQ9CU62 AC069074.1-201ENSMUST00000220048 381 ntBASIC2□□□□□ -2.09
Smc1aQ9CU62 Gm45815-201ENSMUST00000220241 146 ntBASIC2□□□□□ -2.09
Smc1aQ9CU62 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Smc1aQ9CU62 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Smc1aQ9CU62 Gm25813-201ENSMUST00000082748 191 ntBASIC2□□□□□ -2.09
Smc1aQ9CU62 Gm25579-201ENSMUST00000083407 106 ntBASIC2□□□□□ -2.09
Smc1aQ9CU62 Gm25207-201ENSMUST00000093745 107 ntBASIC2□□□□□ -2.09
Smc1aQ9CU62 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2□□□□□ -2.09
Smc1aQ9CU62 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Gm14674-201ENSMUST00000117816 342 ntBASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Gm13457-201ENSMUST00000117885 267 ntBASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Gm14287-201ENSMUST00000121060 117 ntBASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Gm15365-201ENSMUST00000122392 300 ntBASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Gm22217-201ENSMUST00000157556 313 ntBASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Gm37923-201ENSMUST00000191624 161 ntBASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Gm37778-201ENSMUST00000191732 190 ntBASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Gm43431-201ENSMUST00000198577 340 ntBASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Gm44482-201ENSMUST00000199232 103 ntBASIC1.99□□□□□ -2.09
Smc1aQ9CU62 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Gm24805-201ENSMUST00000082931 104 ntBASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Gm3867-201ENSMUST00000086108 279 ntBASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Smc1aQ9CU62 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.98□□□□□ -2.09
Smc1aQ9CU62 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC1.98□□□□□ -2.09
Smc1aQ9CU62 Gm24478-201ENSMUST00000157439 158 ntBASIC1.98□□□□□ -2.09
Smc1aQ9CU62 Gm22338-201ENSMUST00000157715 129 ntBASIC1.98□□□□□ -2.09
Smc1aQ9CU62 Snord87-201ENSMUST00000175437 87 ntBASIC1.98□□□□□ -2.09
Smc1aQ9CU62 Gm18291-201ENSMUST00000190791 301 ntBASIC1.98□□□□□ -2.09
Smc1aQ9CU62 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.98□□□□□ -2.09
Smc1aQ9CU62 Gm42960-201ENSMUST00000202160 241 ntBASIC1.98□□□□□ -2.09
Smc1aQ9CU62 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.98□□□□□ -2.09
Smc1aQ9CU62 Rny3-201ENSMUST00000083011 102 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms