Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm25333-201ENSMUST00000158035 246 ntBASIC1.94□□□□□ -2.1
Ccdc43Q9CR29 Gm17148-201ENSMUST00000164702 249 ntBASIC1.94□□□□□ -2.1
Ccdc43Q9CR29 Gm25035-201ENSMUST00000175414 77 ntBASIC1.94□□□□□ -2.1
Ccdc43Q9CR29 Gm25730-201ENSMUST00000178753 165 ntBASIC1.94□□□□□ -2.1
Ccdc43Q9CR29 Gm22510-201ENSMUST00000179304 79 ntBASIC1.94□□□□□ -2.1
Ccdc43Q9CR29 Gm26336-201ENSMUST00000179449 79 ntBASIC1.94□□□□□ -2.1
Ccdc43Q9CR29 Gm26390-201ENSMUST00000179628 79 ntBASIC1.94□□□□□ -2.1
Ccdc43Q9CR29 Gm29005-201ENSMUST00000186773 320 ntBASIC1.94□□□□□ -2.1
Ccdc43Q9CR29 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Ccdc43Q9CR29 Gm22972-201ENSMUST00000083297 131 ntBASIC1.94□□□□□ -2.1
Ccdc43Q9CR29 Gm23100-201ENSMUST00000083455 141 ntBASIC1.94□□□□□ -2.1
Ccdc43Q9CR29 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
Ccdc43Q9CR29 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.93□□□□□ -2.1
Ccdc43Q9CR29 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.93□□□□□ -2.1
Ccdc43Q9CR29 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.93□□□□□ -2.1
Ccdc43Q9CR29 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.93□□□□□ -2.1
Ccdc43Q9CR29 Gm24726-201ENSMUST00000158232 121 ntBASIC1.93□□□□□ -2.1
Ccdc43Q9CR29 Gm23059-201ENSMUST00000158978 107 ntBASIC1.93□□□□□ -2.1
Ccdc43Q9CR29 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.93□□□□□ -2.1
Ccdc43Q9CR29 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC1.93□□□□□ -2.1
Ccdc43Q9CR29 Gm36891-201ENSMUST00000191995 655 ntBASIC1.93□□□□□ -2.1
Ccdc43Q9CR29 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Ccdc43Q9CR29 Gm46312-201ENSMUST00000220961 420 ntBASIC1.93□□□□□ -2.1
Ccdc43Q9CR29 Gm24165-201ENSMUST00000082718 128 ntBASIC1.93□□□□□ -2.1
Ccdc43Q9CR29 Gm25207-201ENSMUST00000093745 107 ntBASIC1.93□□□□□ -2.1
Ccdc43Q9CR29 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.93□□□□□ -2.1
Ccdc43Q9CR29 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm22221-201ENSMUST00000157362 103 ntBASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm22075-201ENSMUST00000158599 192 ntBASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm16038-201ENSMUST00000159317 193 ntBASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm26430-201ENSMUST00000178054 107 ntBASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Mir6388-201ENSMUST00000184417 75 ntBASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm45815-201ENSMUST00000220241 146 ntBASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Ccdc43Q9CR29 Gm14797-201ENSMUST00000119378 1480 ntBASIC1.91□□□□□ -2.1
Ccdc43Q9CR29 Gm26249-201ENSMUST00000116708 118 ntBASIC1.91□□□□□ -2.1
Ccdc43Q9CR29 Gm22193-201ENSMUST00000116868 76 ntBASIC1.91□□□□□ -2.1
Ccdc43Q9CR29 Gm12351-201ENSMUST00000118727 292 ntBASIC1.91□□□□□ -2.1
Ccdc43Q9CR29 Gm6444-201ENSMUST00000119611 458 ntBASIC1.91□□□□□ -2.1
Ccdc43Q9CR29 Gm11522-201ENSMUST00000120533 176 ntBASIC1.91□□□□□ -2.1
Ccdc43Q9CR29 Gm14972-201ENSMUST00000121780 364 ntBASIC1.91□□□□□ -2.1
Ccdc43Q9CR29 Gm25279-201ENSMUST00000122608 133 ntBASIC1.91□□□□□ -2.1
Ccdc43Q9CR29 Gm23043-201ENSMUST00000157890 109 ntBASIC1.91□□□□□ -2.1
Ccdc43Q9CR29 Gm23016-201ENSMUST00000158431 62 ntBASIC1.91□□□□□ -2.1
Ccdc43Q9CR29 Gm25314-201ENSMUST00000178810 79 ntBASIC1.91□□□□□ -2.1
Ccdc43Q9CR29 Mir7062-201ENSMUST00000185038 66 ntBASIC1.91□□□□□ -2.1
Ccdc43Q9CR29 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Ccdc43Q9CR29 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.91□□□□□ -2.1
Ccdc43Q9CR29 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Ccdc43Q9CR29 Mir223-201ENSMUST00000102112 110 ntBASIC1.9□□□□□ -2.11
Ccdc43Q9CR29 Gm14269-201ENSMUST00000120455 306 ntBASIC1.9□□□□□ -2.11
Ccdc43Q9CR29 Gm14287-201ENSMUST00000121060 117 ntBASIC1.9□□□□□ -2.11
Ccdc43Q9CR29 Gm12770-201ENSMUST00000121734 462 ntBASIC1.9□□□□□ -2.11
Ccdc43Q9CR29 Gm22263-201ENSMUST00000180060 104 ntBASIC1.9□□□□□ -2.11
Ccdc43Q9CR29 Gm43431-201ENSMUST00000198577 340 ntBASIC1.9□□□□□ -2.11
Ccdc43Q9CR29 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Ccdc43Q9CR29 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.9□□□□□ -2.11
Ccdc43Q9CR29 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.9□□□□□ -2.11
Ccdc43Q9CR29 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Ccdc43Q9CR29 Gm24406-201ENSMUST00000083026 128 ntBASIC1.9□□□□□ -2.11
Ccdc43Q9CR29 Mir340-201ENSMUST00000083483 98 ntBASIC1.9□□□□□ -2.11
Ccdc43Q9CR29 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Ccdc43Q9CR29 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ccdc43Q9CR29 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Ccdc43Q9CR29 Gm14709-201ENSMUST00000121225 304 ntBASIC1.89□□□□□ -2.11
Ccdc43Q9CR29 Gm25543-201ENSMUST00000122678 312 ntBASIC1.89□□□□□ -2.11
Ccdc43Q9CR29 Gm24851-201ENSMUST00000158028 103 ntBASIC1.89□□□□□ -2.11
Ccdc43Q9CR29 Gm24858-201ENSMUST00000158058 323 ntBASIC1.89□□□□□ -2.11
Ccdc43Q9CR29 Mir7241-201ENSMUST00000184532 64 ntBASIC1.89□□□□□ -2.11
Ccdc43Q9CR29 Mir7226-201ENSMUST00000184953 60 ntBASIC1.89□□□□□ -2.11
Ccdc43Q9CR29 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.89□□□□□ -2.11
Ccdc43Q9CR29 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.89□□□□□ -2.11
Ccdc43Q9CR29 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.89□□□□□ -2.11
Ccdc43Q9CR29 Gm45402-201ENSMUST00000211796 223 ntBASIC1.89□□□□□ -2.11
Ccdc43Q9CR29 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.89□□□□□ -2.11
Ccdc43Q9CR29 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ccdc43Q9CR29 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Ccdc43Q9CR29 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Mir374b-201ENSMUST00000102314 95 ntBASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Snord98-201ENSMUST00000116819 65 ntBASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Gm15861-201ENSMUST00000120979 339 ntBASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Gm22199-201ENSMUST00000122660 126 ntBASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Gm22665-201ENSMUST00000158720 275 ntBASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Gm22136-201ENSMUST00000158751 268 ntBASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Gm24085-201ENSMUST00000175172 116 ntBASIC1.88□□□□□ -2.11
Ccdc43Q9CR29 Gm21754-201ENSMUST00000177550 479 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 140.7 ms