Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm43556-201ENSMUST00000196186 681 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm43035-201ENSMUST00000197626 517 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm44429-201ENSMUST00000203542 186 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm7495-201ENSMUST00000215099 426 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm23629-201ENSMUST00000082465 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm23924-201ENSMUST00000082474 108 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm22246-201ENSMUST00000082478 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm22749-201ENSMUST00000082490 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm22747-201ENSMUST00000082495 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm22063-201ENSMUST00000082560 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm23057-201ENSMUST00000082801 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm26331-201ENSMUST00000082824 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm24205-201ENSMUST00000082953 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm25405-201ENSMUST00000082973 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm22628-201ENSMUST00000082988 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm26324-201ENSMUST00000083073 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm24535-201ENSMUST00000083140 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm26496-201ENSMUST00000083150 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm26127-201ENSMUST00000083193 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm24456-201ENSMUST00000083198 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm24458-201ENSMUST00000083204 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm24018-201ENSMUST00000083232 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm25790-201ENSMUST00000083293 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm22295-201ENSMUST00000083311 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm25127-201ENSMUST00000083336 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm25583-201ENSMUST00000083413 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm25577-201ENSMUST00000083414 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm24414-201ENSMUST00000083434 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm24861-201ENSMUST00000083459 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm24803-201ENSMUST00000083693 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm23103-201ENSMUST00000083725 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm22580-201ENSMUST00000083727 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm24260-201ENSMUST00000083741 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm23732-201ENSMUST00000083751 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm22682-201ENSMUST00000083854 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm25869-201ENSMUST00000083855 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm24693-201ENSMUST00000083885 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm26317-201ENSMUST00000083894 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm22352-201ENSMUST00000083917 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm24448-201ENSMUST00000083979 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm22798-201ENSMUST00000083992 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm26427-201ENSMUST00000093648 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm22886-201ENSMUST00000093714 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Gm22170-201ENSMUST00000097247 107 ntBASIC1.27□□□□□ -2.21
Use1Q9CQ56 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
Use1Q9CQ56 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.26□□□□□ -2.21
Use1Q9CQ56 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Use1Q9CQ56 Gm25371-201ENSMUST00000158162 101 ntBASIC1.26□□□□□ -2.21
Use1Q9CQ56 Rnu7-201ENSMUST00000158458 62 ntBASIC1.26□□□□□ -2.21
Use1Q9CQ56 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.26□□□□□ -2.21
Use1Q9CQ56 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC1.26□□□□□ -2.21
Use1Q9CQ56 Gm28912-201ENSMUST00000189001 234 ntBASIC1.26□□□□□ -2.21
Use1Q9CQ56 Gm29037-201ENSMUST00000189092 313 ntBASIC1.26□□□□□ -2.21
Use1Q9CQ56 Gm37579-201ENSMUST00000194291 142 ntBASIC1.26□□□□□ -2.21
Use1Q9CQ56 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.26□□□□□ -2.21
Use1Q9CQ56 Gm25820-202ENSMUST00000197479 128 ntBASIC1.26□□□□□ -2.21
Use1Q9CQ56 Gm19441-201ENSMUST00000221545 330 ntBASIC1.26□□□□□ -2.21
Use1Q9CQ56 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.26□□□□□ -2.21
Use1Q9CQ56 AC167669.4-201ENSMUST00000225967 140 ntBASIC1.26□□□□□ -2.21
Use1Q9CQ56 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
Use1Q9CQ56 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.26□□□□□ -2.21
Use1Q9CQ56 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.26□□□□□ -2.21
Use1Q9CQ56 Gm23208-201ENSMUST00000158666 127 ntBASIC1.25□□□□□ -2.21
Use1Q9CQ56 Gm22663-201ENSMUST00000158721 102 ntBASIC1.25□□□□□ -2.21
Use1Q9CQ56 Gm23339-201ENSMUST00000158962 139 ntBASIC1.25□□□□□ -2.21
Use1Q9CQ56 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Use1Q9CQ56 Gm27493-201ENSMUST00000184128 78 ntBASIC1.25□□□□□ -2.21
Use1Q9CQ56 Mir7675-201ENSMUST00000184262 58 ntBASIC1.25□□□□□ -2.21
Use1Q9CQ56 Gm29352-201ENSMUST00000188054 544 ntBASIC1.25□□□□□ -2.21
Use1Q9CQ56 Gm28926-201ENSMUST00000191063 680 ntBASIC1.25□□□□□ -2.21
Use1Q9CQ56 Gm44337-201ENSMUST00000196553 114 ntBASIC1.25□□□□□ -2.21
Use1Q9CQ56 Gm45296-201ENSMUST00000209625 205 ntBASIC1.25□□□□□ -2.21
Use1Q9CQ56 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Use1Q9CQ56 Gm24615-201ENSMUST00000083268 113 ntBASIC1.25□□□□□ -2.21
Use1Q9CQ56 Gm23245-201ENSMUST00000083370 135 ntBASIC1.25□□□□□ -2.21
Use1Q9CQ56 Gm25896-201ENSMUST00000083713 136 ntBASIC1.25□□□□□ -2.21
Use1Q9CQ56 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 AC124426.1-203ENSMUST00000221814 1362 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Gm14882-201ENSMUST00000117216 218 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Gm14355-201ENSMUST00000117352 264 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Gm14823-201ENSMUST00000117698 238 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Gm14364-201ENSMUST00000129209 267 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Gm23122-201ENSMUST00000157645 103 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Gm22537-201ENSMUST00000158172 199 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Gm9830-201ENSMUST00000178509 357 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Gm24390-201ENSMUST00000179578 62 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Mir7017-201ENSMUST00000184894 62 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Gm29613-201ENSMUST00000185846 313 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Gm29544-201ENSMUST00000188860 313 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Gm29350-201ENSMUST00000189141 541 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Gm28437-201ENSMUST00000190277 783 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Gm28808-201ENSMUST00000190978 313 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Gm34073-201ENSMUST00000195736 212 ntBASIC1.24□□□□□ -2.21
Use1Q9CQ56 Mir743b-201ENSMUST00000104751 77 ntBASIC1.23□□□□□ -2.21
Use1Q9CQ56 Gm26278-201ENSMUST00000157098 132 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms