Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm14629-201ENSMUST00000122428 144 ntBASIC3.91□□□□□ -1.78
Trim11Q99PQ2 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.91□□□□□ -1.78
Trim11Q99PQ2 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trim11Q99PQ2 Mir5112-201ENSMUST00000174897 60 ntBASIC3.91□□□□□ -1.78
Trim11Q99PQ2 Gm28000-201ENSMUST00000184380 85 ntBASIC3.91□□□□□ -1.78
Trim11Q99PQ2 Gm27520-201ENSMUST00000184872 81 ntBASIC3.91□□□□□ -1.78
Trim11Q99PQ2 Gm37290-201ENSMUST00000195775 339 ntBASIC3.91□□□□□ -1.78
Trim11Q99PQ2 Gm44355-201ENSMUST00000200417 104 ntBASIC3.91□□□□□ -1.78
Trim11Q99PQ2 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trim11Q99PQ2 Gm23303-201ENSMUST00000082714 152 ntBASIC3.91□□□□□ -1.78
Trim11Q99PQ2 Mir346-201ENSMUST00000083547 98 ntBASIC3.91□□□□□ -1.78
Trim11Q99PQ2 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trim11Q99PQ2 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trim11Q99PQ2 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Trim11Q99PQ2 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Trim11Q99PQ2 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Trim11Q99PQ2 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Trim11Q99PQ2 Gm22004-201ENSMUST00000101884 107 ntBASIC3.9□□□□□ -1.79
Trim11Q99PQ2 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim11Q99PQ2 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim11Q99PQ2 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim11Q99PQ2 Gm17522-201ENSMUST00000178144 498 ntBASIC3.9□□□□□ -1.79
Trim11Q99PQ2 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim11Q99PQ2 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim11Q99PQ2 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.9□□□□□ -1.79
Trim11Q99PQ2 Mir132-201ENSMUST00000083603 66 ntBASIC3.9□□□□□ -1.79
Trim11Q99PQ2 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim11Q99PQ2 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Mir767-201ENSMUST00000103256 107 ntBASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Gm25753-201ENSMUST00000116792 121 ntBASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Gm15714-201ENSMUST00000117168 250 ntBASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Gm6952-201ENSMUST00000118629 159 ntBASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Gm16186-201ENSMUST00000120132 216 ntBASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Gm23671-201ENSMUST00000157472 103 ntBASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Gm25646-201ENSMUST00000178527 79 ntBASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Gm18486-201ENSMUST00000184040 298 ntBASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Gm43680-201ENSMUST00000199466 340 ntBASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Gm25142-201ENSMUST00000082698 107 ntBASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Gm22421-201ENSMUST00000083058 107 ntBASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim11Q99PQ2 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim11Q99PQ2 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Trim11Q99PQ2 Gm14811-201ENSMUST00000117070 117 ntBASIC3.88□□□□□ -1.79
Trim11Q99PQ2 Gm12427-201ENSMUST00000117719 302 ntBASIC3.88□□□□□ -1.79
Trim11Q99PQ2 Gm12723-201ENSMUST00000120700 451 ntBASIC3.88□□□□□ -1.79
Trim11Q99PQ2 Gm25860-201ENSMUST00000158252 126 ntBASIC3.88□□□□□ -1.79
Trim11Q99PQ2 Mir6914-201ENSMUST00000184999 69 ntBASIC3.88□□□□□ -1.79
Trim11Q99PQ2 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.88□□□□□ -1.79
Trim11Q99PQ2 AC160962.3-201ENSMUST00000225914 112 ntBASIC3.88□□□□□ -1.79
Trim11Q99PQ2 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.88□□□□□ -1.79
Trim11Q99PQ2 AC121898.1-201ENSMUST00000227599 288 ntBASIC3.88□□□□□ -1.79
Trim11Q99PQ2 Gm22950-201ENSMUST00000082776 107 ntBASIC3.88□□□□□ -1.79
Trim11Q99PQ2 Gm25630-201ENSMUST00000084000 162 ntBASIC3.88□□□□□ -1.79
Trim11Q99PQ2 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim11Q99PQ2 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trim11Q99PQ2 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.88□□□□□ -1.79
Trim11Q99PQ2 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim11Q99PQ2 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.87□□□□□ -1.79
Trim11Q99PQ2 Gm12934-201ENSMUST00000119221 343 ntBASIC3.87□□□□□ -1.79
Trim11Q99PQ2 Gm15067-201ENSMUST00000119534 156 ntBASIC3.87□□□□□ -1.79
Trim11Q99PQ2 Gm25107-201ENSMUST00000122472 129 ntBASIC3.87□□□□□ -1.79
Trim11Q99PQ2 Gm23755-201ENSMUST00000157578 343 ntBASIC3.87□□□□□ -1.79
Trim11Q99PQ2 Mir7657-201ENSMUST00000196051 57 ntBASIC3.87□□□□□ -1.79
Trim11Q99PQ2 Gm44429-201ENSMUST00000203542 186 ntBASIC3.87□□□□□ -1.79
Trim11Q99PQ2 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.87□□□□□ -1.79
Trim11Q99PQ2 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.87□□□□□ -1.79
Trim11Q99PQ2 Snord35b-201ENSMUST00000082833 87 ntBASIC3.87□□□□□ -1.79
Trim11Q99PQ2 Gm24355-201ENSMUST00000082858 122 ntBASIC3.87□□□□□ -1.79
Trim11Q99PQ2 AF357341-201ENSMUST00000083088 75 ntBASIC3.87□□□□□ -1.79
Trim11Q99PQ2 Snord14d-201ENSMUST00000083424 86 ntBASIC3.87□□□□□ -1.79
Trim11Q99PQ2 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim11Q99PQ2 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Trim11Q99PQ2 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm27592-201ENSMUST00000157729 126 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm22789-201ENSMUST00000157884 130 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm22665-201ENSMUST00000158720 275 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm24877-201ENSMUST00000158779 116 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm22174-201ENSMUST00000175050 125 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm22692-201ENSMUST00000175055 125 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm27634-201ENSMUST00000175060 126 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm22460-201ENSMUST00000175269 124 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Mir5127-201ENSMUST00000175295 71 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm26141-201ENSMUST00000175299 126 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm25535-201ENSMUST00000175364 125 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm24365-201ENSMUST00000175384 125 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm44310-201ENSMUST00000175424 126 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm22639-201ENSMUST00000175591 125 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm24979-201ENSMUST00000178626 126 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm27743-201ENSMUST00000185136 126 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm19786-201ENSMUST00000222589 580 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Gm23038-201ENSMUST00000083873 104 ntBASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim11Q99PQ2 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms