Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Gm24977-201ENSMUST00000083106 163 ntBASIC2.25□□□□□ -2.05
Vmp1Q99KU0 Mir127-201ENSMUST00000093568 70 ntBASIC2.25□□□□□ -2.05
Vmp1Q99KU0 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
Vmp1Q99KU0 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm24274-201ENSMUST00000116787 124 ntBASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm14906-201ENSMUST00000119265 390 ntBASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm13729-201ENSMUST00000120328 406 ntBASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm17100-201ENSMUST00000168963 272 ntBASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm5900-201ENSMUST00000179862 375 ntBASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm3852-201ENSMUST00000182781 264 ntBASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm27979-201ENSMUST00000185126 56 ntBASIC2.24□□□□□ -2.05
Vmp1Q99KU0 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm45344-201ENSMUST00000211610 341 ntBASIC2.24□□□□□ -2.05
Vmp1Q99KU0 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.24□□□□□ -2.05
Vmp1Q99KU0 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm23041-201ENSMUST00000083868 106 ntBASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm22365-201ENSMUST00000093750 117 ntBASIC2.24□□□□□ -2.05
Vmp1Q99KU0 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Gm22752-201ENSMUST00000102083 109 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Gm25421-201ENSMUST00000104218 164 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Gm11420-201ENSMUST00000120047 402 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Gm6956-201ENSMUST00000134724 546 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Gm22083-201ENSMUST00000157586 102 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Mir3086-201ENSMUST00000175072 87 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Mir669a-7-201ENSMUST00000180364 87 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Gm26968-201ENSMUST00000182894 481 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Mir669a-6-201ENSMUST00000196127 87 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Mir669a-12-201ENSMUST00000197274 87 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Mir669a-5-201ENSMUST00000197439 87 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Mir669a-10-201ENSMUST00000197745 87 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Mir669a-11-201ENSMUST00000197952 87 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Mir669a-4-201ENSMUST00000198665 87 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Mir669a-9-201ENSMUST00000200087 87 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Mir669a-8-201ENSMUST00000200268 87 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Gm44655-201ENSMUST00000207768 423 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Gm34783-201ENSMUST00000209159 303 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Gm5023-201ENSMUST00000217442 587 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Gm22972-201ENSMUST00000083297 131 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Gm25578-201ENSMUST00000083406 104 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Mir429-201ENSMUST00000083493 83 ntBASIC2.23□□□□□ -2.05
Vmp1Q99KU0 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Mir872-201ENSMUST00000104728 81 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Gm22193-201ENSMUST00000116868 76 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Gm6829-201ENSMUST00000119858 360 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Gm26280-201ENSMUST00000157096 101 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Gm22791-201ENSMUST00000157232 145 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Gm24210-201ENSMUST00000158263 133 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Gm22517-201ENSMUST00000158265 136 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Gm23005-201ENSMUST00000158950 136 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Gm20438-201ENSMUST00000174441 329 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Gm10105-201ENSMUST00000184601 270 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Gm2719-201ENSMUST00000191929 444 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Gm37399-201ENSMUST00000195224 416 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 AC109214.2-201ENSMUST00000220089 358 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Gm25796-201ENSMUST00000082645 163 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Gm25813-201ENSMUST00000082748 191 ntBASIC2.22□□□□□ -2.05
Vmp1Q99KU0 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Gm43484-201ENSMUST00000198333 5966 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Gm42606-201ENSMUST00000114209 239 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Gm25827-201ENSMUST00000157089 107 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Gm23435-201ENSMUST00000157183 156 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Gm27369-201ENSMUST00000185182 71 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Gm19901-201ENSMUST00000192191 495 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Gm18546-201ENSMUST00000197245 676 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Gm44010-201ENSMUST00000204432 331 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC2.21□□□□□ -2.06
Vmp1Q99KU0 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 AC165293.1-201ENSMUST00000219669 329 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.21□□□□□ -2.06
Vmp1Q99KU0 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Gm24313-201ENSMUST00000082561 133 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Gm24151-201ENSMUST00000082758 141 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Gm24661-201ENSMUST00000083205 104 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Mir181a-1-201ENSMUST00000083631 87 ntBASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.21□□□□□ -2.06
Vmp1Q99KU0 Gm22221-201ENSMUST00000157362 103 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms