Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm42578-201ENSMUST00000199960 194 ntBASIC2.6□□□□□ -1.99
Usp11Q99K46 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.6□□□□□ -1.99
Usp11Q99K46 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.6□□□□□ -1.99
Usp11Q99K46 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Usp11Q99K46 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.6□□□□□ -1.99
Usp11Q99K46 Gm10033-201ENSMUST00000072427 1813 ntBASIC2.6□□□□□ -1.99
Usp11Q99K46 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.6□□□□□ -1.99
Usp11Q99K46 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
Usp11Q99K46 Gm11572-201ENSMUST00000119164 120 ntBASIC2.59□□□□□ -1.99
Usp11Q99K46 Gm27396-201ENSMUST00000157708 58 ntBASIC2.59□□□□□ -1.99
Usp11Q99K46 Gm24846-201ENSMUST00000158033 108 ntBASIC2.59□□□□□ -1.99
Usp11Q99K46 Gm24726-201ENSMUST00000158232 121 ntBASIC2.59□□□□□ -1.99
Usp11Q99K46 Gm23355-201ENSMUST00000177614 107 ntBASIC2.59□□□□□ -1.99
Usp11Q99K46 Gm23148-201ENSMUST00000180367 107 ntBASIC2.59□□□□□ -1.99
Usp11Q99K46 Gm28848-201ENSMUST00000189984 168 ntBASIC2.59□□□□□ -1.99
Usp11Q99K46 Gm43978-201ENSMUST00000203491 451 ntBASIC2.59□□□□□ -1.99
Usp11Q99K46 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Usp11Q99K46 Gm7065-201ENSMUST00000222150 474 ntBASIC2.59□□□□□ -1.99
Usp11Q99K46 AL606472.1-201ENSMUST00000224628 275 ntBASIC2.59□□□□□ -1.99
Usp11Q99K46 AC167140.1-201ENSMUST00000224710 403 ntBASIC2.59□□□□□ -1.99
Usp11Q99K46 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.59□□□□□ -1.99
Usp11Q99K46 Gm25258-201ENSMUST00000083049 107 ntBASIC2.59□□□□□ -1.99
Usp11Q99K46 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.59□□□□□ -1.99
Usp11Q99K46 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Usp11Q99K46 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Usp11Q99K46 Gm24670-201ENSMUST00000104154 132 ntBASIC2.58□□□□□ -2
Usp11Q99K46 Mir875-201ENSMUST00000104698 78 ntBASIC2.58□□□□□ -2
Usp11Q99K46 Gm13378-201ENSMUST00000117483 336 ntBASIC2.58□□□□□ -2
Usp11Q99K46 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.58□□□□□ -2
Usp11Q99K46 Gm27723-201ENSMUST00000157398 63 ntBASIC2.58□□□□□ -2
Usp11Q99K46 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.58□□□□□ -2
Usp11Q99K46 Gm24799-201ENSMUST00000178431 79 ntBASIC2.58□□□□□ -2
Usp11Q99K46 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.58□□□□□ -2
Usp11Q99K46 Gm38060-201ENSMUST00000194822 464 ntBASIC2.58□□□□□ -2
Usp11Q99K46 Mir3068-202ENSMUST00000197755 79 ntBASIC2.58□□□□□ -2
Usp11Q99K46 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC2.58□□□□□ -2
Usp11Q99K46 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.58□□□□□ -2
Usp11Q99K46 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.58□□□□□ -2
Usp11Q99K46 Gm25078-201ENSMUST00000082530 107 ntBASIC2.58□□□□□ -2
Usp11Q99K46 Gm22622-201ENSMUST00000082870 129 ntBASIC2.58□□□□□ -2
Usp11Q99K46 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.57□□□□□ -2
Usp11Q99K46 Gm23202-201ENSMUST00000104376 129 ntBASIC2.57□□□□□ -2
Usp11Q99K46 Gm6574-201ENSMUST00000120037 362 ntBASIC2.57□□□□□ -2
Usp11Q99K46 Gm12155-201ENSMUST00000121267 160 ntBASIC2.57□□□□□ -2
Usp11Q99K46 Gm23600-201ENSMUST00000157260 71 ntBASIC2.57□□□□□ -2
Usp11Q99K46 Gm25454-201ENSMUST00000157947 315 ntBASIC2.57□□□□□ -2
Usp11Q99K46 Gm25362-201ENSMUST00000158854 105 ntBASIC2.57□□□□□ -2
Usp11Q99K46 Gm23476-201ENSMUST00000158881 274 ntBASIC2.57□□□□□ -2
Usp11Q99K46 Gm27747-201ENSMUST00000184707 85 ntBASIC2.57□□□□□ -2
Usp11Q99K46 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.57□□□□□ -2
Usp11Q99K46 Gm43722-201ENSMUST00000196054 124 ntBASIC2.57□□□□□ -2
Usp11Q99K46 Gm43626-201ENSMUST00000198575 162 ntBASIC2.57□□□□□ -2
Usp11Q99K46 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.57□□□□□ -2
Usp11Q99K46 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.57□□□□□ -2
Usp11Q99K46 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Usp11Q99K46 Gm10222-201ENSMUST00000088336 294 ntBASIC2.57□□□□□ -2
Usp11Q99K46 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.57□□□□□ -2
Usp11Q99K46 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Usp11Q99K46 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.56□□□□□ -2
Usp11Q99K46 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Usp11Q99K46 Gm15002-201ENSMUST00000118406 452 ntBASIC2.56□□□□□ -2
Usp11Q99K46 Gm12876-201ENSMUST00000120975 408 ntBASIC2.56□□□□□ -2
Usp11Q99K46 Gm25543-201ENSMUST00000122678 312 ntBASIC2.56□□□□□ -2
Usp11Q99K46 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.56□□□□□ -2
Usp11Q99K46 Gm22316-201ENSMUST00000158012 216 ntBASIC2.56□□□□□ -2
Usp11Q99K46 Gm22011-201ENSMUST00000158790 123 ntBASIC2.56□□□□□ -2
Usp11Q99K46 Mir3076-201ENSMUST00000175415 60 ntBASIC2.56□□□□□ -2
Usp11Q99K46 Gm23963-201ENSMUST00000179603 77 ntBASIC2.56□□□□□ -2
Usp11Q99K46 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.56□□□□□ -2
Usp11Q99K46 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Usp11Q99K46 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.56□□□□□ -2
Usp11Q99K46 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.56□□□□□ -2
Usp11Q99K46 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.56□□□□□ -2
Usp11Q99K46 Gm26497-201ENSMUST00000083146 107 ntBASIC2.56□□□□□ -2
Usp11Q99K46 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.56□□□□□ -2
Usp11Q99K46 Snord7-201ENSMUST00000083781 97 ntBASIC2.56□□□□□ -2
Usp11Q99K46 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.56□□□□□ -2
Usp11Q99K46 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Usp11Q99K46 Mir872-201ENSMUST00000104728 81 ntBASIC2.55□□□□□ -2
Usp11Q99K46 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Usp11Q99K46 Gm13432-201ENSMUST00000118861 241 ntBASIC2.55□□□□□ -2
Usp11Q99K46 Gm15497-201ENSMUST00000119137 551 ntBASIC2.55□□□□□ -2
Usp11Q99K46 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.55□□□□□ -2
Usp11Q99K46 Gm13913-201ENSMUST00000121126 260 ntBASIC2.55□□□□□ -2
Usp11Q99K46 Gm25945-201ENSMUST00000122484 135 ntBASIC2.55□□□□□ -2
Usp11Q99K46 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.55□□□□□ -2
Usp11Q99K46 Gm26099-201ENSMUST00000157248 109 ntBASIC2.55□□□□□ -2
Usp11Q99K46 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.55□□□□□ -2
Usp11Q99K46 Gm29553-201ENSMUST00000189692 279 ntBASIC2.55□□□□□ -2
Usp11Q99K46 Gm28744-201ENSMUST00000189939 340 ntBASIC2.55□□□□□ -2
Usp11Q99K46 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.55□□□□□ -2
Usp11Q99K46 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.55□□□□□ -2
Usp11Q99K46 Gm45445-201ENSMUST00000209586 232 ntBASIC2.55□□□□□ -2
Usp11Q99K46 Gm45288-201ENSMUST00000210236 151 ntBASIC2.55□□□□□ -2
Usp11Q99K46 Gm4945-201ENSMUST00000075152 453 ntBASIC2.55□□□□□ -2
Usp11Q99K46 Gm22062-201ENSMUST00000082563 107 ntBASIC2.55□□□□□ -2
Usp11Q99K46 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Usp11Q99K46 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Usp11Q99K46 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Usp11Q99K46 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 143.4 ms