Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.64□□□□□ -1.83
Rpa1Q8VEE4 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Rpa1Q8VEE4 Gm24126-201ENSMUST00000104111 106 ntBASIC3.63□□□□□ -1.83
Rpa1Q8VEE4 Gm23532-201ENSMUST00000104569 112 ntBASIC3.63□□□□□ -1.83
Rpa1Q8VEE4 Mir1298-201ENSMUST00000116681 98 ntBASIC3.63□□□□□ -1.83
Rpa1Q8VEE4 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC3.63□□□□□ -1.83
Rpa1Q8VEE4 Gm24503-201ENSMUST00000158454 135 ntBASIC3.63□□□□□ -1.83
Rpa1Q8VEE4 Gm27834-201ENSMUST00000183427 125 ntBASIC3.63□□□□□ -1.83
Rpa1Q8VEE4 Mir3620-201ENSMUST00000184710 61 ntBASIC3.63□□□□□ -1.83
Rpa1Q8VEE4 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.63□□□□□ -1.83
Rpa1Q8VEE4 Mir5121-201ENSMUST00000198528 74 ntBASIC3.63□□□□□ -1.83
Rpa1Q8VEE4 Gm44256-201ENSMUST00000203304 335 ntBASIC3.63□□□□□ -1.83
Rpa1Q8VEE4 CT485607.2-201ENSMUST00000214650 91 ntBASIC3.63□□□□□ -1.83
Rpa1Q8VEE4 Gm4945-201ENSMUST00000075152 453 ntBASIC3.63□□□□□ -1.83
Rpa1Q8VEE4 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.63□□□□□ -1.83
Rpa1Q8VEE4 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Mir551b-201ENSMUST00000102165 98 ntBASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Mir466b-3-201ENSMUST00000103806 81 ntBASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Gm23273-201ENSMUST00000104058 135 ntBASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Gm13885-201ENSMUST00000117569 187 ntBASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Gm23337-201ENSMUST00000158959 118 ntBASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Gm22853-201ENSMUST00000174974 131 ntBASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Mir28b-201ENSMUST00000175399 80 ntBASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Gm10292-201ENSMUST00000183142 581 ntBASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Mir21b-201ENSMUST00000184317 108 ntBASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Gm43899-201ENSMUST00000203675 246 ntBASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 AF357341-201ENSMUST00000083088 75 ntBASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Rpa1Q8VEE4 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 Gm15120-201ENSMUST00000120602 301 ntBASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 Gm25438-201ENSMUST00000158281 110 ntBASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 Snord11-201ENSMUST00000158468 84 ntBASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 Gm20613-201ENSMUST00000175828 345 ntBASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 Gm27698-201ENSMUST00000184060 249 ntBASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 Gm44338-201ENSMUST00000198614 110 ntBASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Rpa1Q8VEE4 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Rpa1Q8VEE4 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.6□□□□□ -1.83
Rpa1Q8VEE4 Gm22967-201ENSMUST00000157956 239 ntBASIC3.6□□□□□ -1.83
Rpa1Q8VEE4 Gm25436-201ENSMUST00000158275 145 ntBASIC3.6□□□□□ -1.83
Rpa1Q8VEE4 Gm22139-201ENSMUST00000158747 105 ntBASIC3.6□□□□□ -1.83
Rpa1Q8VEE4 Gm10067-201ENSMUST00000179462 348 ntBASIC3.6□□□□□ -1.83
Rpa1Q8VEE4 Gm15235-201ENSMUST00000200572 194 ntBASIC3.6□□□□□ -1.83
Rpa1Q8VEE4 AC069074.2-201ENSMUST00000217819 428 ntBASIC3.6□□□□□ -1.83
Rpa1Q8VEE4 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.6□□□□□ -1.83
Rpa1Q8VEE4 Gm10212-201ENSMUST00000087884 324 ntBASIC3.6□□□□□ -1.83
Rpa1Q8VEE4 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Rpa1Q8VEE4 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Rpa1Q8VEE4 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Rpa1Q8VEE4 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Rpa1Q8VEE4 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Gm22269-201ENSMUST00000104002 130 ntBASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Gm11285-201ENSMUST00000118443 322 ntBASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Gm23655-201ENSMUST00000122627 105 ntBASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Gm25999-201ENSMUST00000175398 133 ntBASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Gm29603-201ENSMUST00000186792 334 ntBASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Gm44425-201ENSMUST00000203739 429 ntBASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Gm18502-201ENSMUST00000218679 199 ntBASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Gm19563-201ENSMUST00000222031 270 ntBASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Gm25814-201ENSMUST00000082754 107 ntBASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Rpa1Q8VEE4 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Rpa1Q8VEE4 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Rpa1Q8VEE4 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Rpa1Q8VEE4 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Rpa1Q8VEE4 Mir374b-201ENSMUST00000102314 95 ntBASIC3.58□□□□□ -1.84
Rpa1Q8VEE4 Gm12213-201ENSMUST00000119924 353 ntBASIC3.58□□□□□ -1.84
Rpa1Q8VEE4 Gm24598-201ENSMUST00000122510 74 ntBASIC3.58□□□□□ -1.84
Rpa1Q8VEE4 Gm24244-201ENSMUST00000157317 130 ntBASIC3.58□□□□□ -1.84
Rpa1Q8VEE4 Gm22816-201ENSMUST00000157450 117 ntBASIC3.58□□□□□ -1.84
Rpa1Q8VEE4 Gm25888-201ENSMUST00000157778 302 ntBASIC3.58□□□□□ -1.84
Rpa1Q8VEE4 Mir6345-201ENSMUST00000184286 128 ntBASIC3.58□□□□□ -1.84
Rpa1Q8VEE4 Mir6899-201ENSMUST00000184798 64 ntBASIC3.58□□□□□ -1.84
Rpa1Q8VEE4 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.58□□□□□ -1.84
Rpa1Q8VEE4 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.58□□□□□ -1.84
Rpa1Q8VEE4 Gm42988-201ENSMUST00000198116 225 ntBASIC3.58□□□□□ -1.84
Rpa1Q8VEE4 Gm44099-201ENSMUST00000203299 112 ntBASIC3.58□□□□□ -1.84
Rpa1Q8VEE4 Mir488-201ENSMUST00000093595 109 ntBASIC3.58□□□□□ -1.84
Rpa1Q8VEE4 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms