Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CopaQ8CIE6 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.78□□□□□ -1.96
CopaQ8CIE6 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CopaQ8CIE6 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.78□□□□□ -1.96
CopaQ8CIE6 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CopaQ8CIE6 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm15010-201ENSMUST00000117153 407 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm11285-201ENSMUST00000118443 322 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm23581-201ENSMUST00000158531 63 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm22416-201ENSMUST00000158590 88 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm25119-201ENSMUST00000158815 88 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm23355-201ENSMUST00000177614 107 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm23148-201ENSMUST00000180367 107 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm27761-201ENSMUST00000184091 131 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm42578-201ENSMUST00000199960 194 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm44655-201ENSMUST00000207768 423 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm44966-201ENSMUST00000208096 157 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm24152-201ENSMUST00000082764 163 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm25258-201ENSMUST00000083049 107 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm23462-201ENSMUST00000083264 104 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CopaQ8CIE6 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CopaQ8CIE6 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.77□□□□□ -1.97
CopaQ8CIE6 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm25500-201ENSMUST00000104426 123 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm26341-201ENSMUST00000104561 134 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Mdga2-203ENSMUST00000113942 423 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm13967-201ENSMUST00000120404 380 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm13581-201ENSMUST00000120675 278 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm15213-201ENSMUST00000122098 216 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm24385-201ENSMUST00000122694 350 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm24892-201ENSMUST00000122747 104 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm24629-201ENSMUST00000122762 89 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm18357-201ENSMUST00000188184 580 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm44055-201ENSMUST00000204376 247 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm45313-201ENSMUST00000210584 178 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm19118-201ENSMUST00000222554 98 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm6030-201ENSMUST00000078768 402 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CopaQ8CIE6 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC2.76□□□□□ -1.97
CopaQ8CIE6 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.76□□□□□ -1.97
CopaQ8CIE6 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.76□□□□□ -1.97
CopaQ8CIE6 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CopaQ8CIE6 Mir344c-201ENSMUST00000103919 92 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm23128-201ENSMUST00000104257 132 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Mir669g-201ENSMUST00000116809 123 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm11572-201ENSMUST00000119164 120 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm25625-201ENSMUST00000157221 96 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm7592-201ENSMUST00000160674 627 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm22258-201ENSMUST00000177645 94 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm26032-201ENSMUST00000178535 94 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm25210-201ENSMUST00000178813 94 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm25157-201ENSMUST00000178914 94 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm22046-201ENSMUST00000179027 94 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm25457-201ENSMUST00000179509 107 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm22941-201ENSMUST00000179630 94 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm25471-201ENSMUST00000180126 94 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm27379-201ENSMUST00000183730 123 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm27521-201ENSMUST00000184022 64 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Mir6399-201ENSMUST00000184050 84 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm27753-201ENSMUST00000184742 203 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm23128-202ENSMUST00000196578 133 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm44429-201ENSMUST00000203542 186 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm2829-201ENSMUST00000213121 499 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.75□□□□□ -1.97
CopaQ8CIE6 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm25078-201ENSMUST00000082530 107 ntBASIC2.75□□□□□ -1.97
CopaQ8CIE6 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
CopaQ8CIE6 Gm22674-201ENSMUST00000104413 131 ntBASIC2.74□□□□□ -1.97
CopaQ8CIE6 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.74□□□□□ -1.97
CopaQ8CIE6 Gm24443-201ENSMUST00000157242 132 ntBASIC2.74□□□□□ -1.97
CopaQ8CIE6 Gm24858-201ENSMUST00000158058 323 ntBASIC2.74□□□□□ -1.97
CopaQ8CIE6 Snord93-201ENSMUST00000175580 71 ntBASIC2.74□□□□□ -1.97
CopaQ8CIE6 Trbv6-201ENSMUST00000193743 276 ntBASIC2.74□□□□□ -1.97
CopaQ8CIE6 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.74□□□□□ -1.97
CopaQ8CIE6 Gm44024-201ENSMUST00000203008 476 ntBASIC2.74□□□□□ -1.97
CopaQ8CIE6 Gm44903-201ENSMUST00000206840 130 ntBASIC2.74□□□□□ -1.97
CopaQ8CIE6 Gm22062-201ENSMUST00000082563 107 ntBASIC2.74□□□□□ -1.97
CopaQ8CIE6 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.74□□□□□ -1.97
CopaQ8CIE6 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CopaQ8CIE6 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CopaQ8CIE6 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.74□□□□□ -1.97
CopaQ8CIE6 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
CopaQ8CIE6 Gm11904-201ENSMUST00000120562 248 ntBASIC2.73□□□□□ -1.97
CopaQ8CIE6 Gm25808-201ENSMUST00000122784 284 ntBASIC2.73□□□□□ -1.97
CopaQ8CIE6 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.73□□□□□ -1.97
CopaQ8CIE6 Mir7242-201ENSMUST00000183710 79 ntBASIC2.73□□□□□ -1.97
CopaQ8CIE6 Gm29005-201ENSMUST00000186773 320 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 189.6 ms