Protein–RNA interactions for Protein: Q8CGV8

Mmp28, Matrix metallopeptidase 28 (epilysin), mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp28Q8CGV8 Gm24350-202ENSMUST00000198309 132 ntBASIC2.17□□□□□ -2.06
Mmp28Q8CGV8 Gm45365-201ENSMUST00000209489 256 ntBASIC2.17□□□□□ -2.06
Mmp28Q8CGV8 Gm7065-201ENSMUST00000222150 474 ntBASIC2.17□□□□□ -2.06
Mmp28Q8CGV8 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.17□□□□□ -2.06
Mmp28Q8CGV8 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Mmp28Q8CGV8 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Mmp28Q8CGV8 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Mmp28Q8CGV8 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.17□□□□□ -2.06
Mmp28Q8CGV8 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Gm22270-201ENSMUST00000104034 132 ntBASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Gm24280-201ENSMUST00000104237 134 ntBASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Gm25526-201ENSMUST00000104332 132 ntBASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Gm15846-201ENSMUST00000116022 320 ntBASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Gm13992-201ENSMUST00000120558 156 ntBASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Gm26027-201ENSMUST00000122725 268 ntBASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Gm23588-201ENSMUST00000157659 99 ntBASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Gm22527-201ENSMUST00000158816 106 ntBASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Gm23268-201ENSMUST00000175494 78 ntBASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Mir7578-201ENSMUST00000183455 82 ntBASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Gm6801-201ENSMUST00000190697 339 ntBASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Gm43901-201ENSMUST00000203247 453 ntBASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Gm44555-201ENSMUST00000209008 148 ntBASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.16□□□□□ -2.06
Mmp28Q8CGV8 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.15□□□□□ -2.06
Mmp28Q8CGV8 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.15□□□□□ -2.06
Mmp28Q8CGV8 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Mmp28Q8CGV8 Gm25500-201ENSMUST00000104426 123 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm14803-201ENSMUST00000117163 361 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm15215-201ENSMUST00000117773 489 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm15497-201ENSMUST00000119137 551 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm12155-201ENSMUST00000121267 160 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 DQ267100-201ENSMUST00000122600 72 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm23642-201ENSMUST00000157858 258 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm24879-201ENSMUST00000158386 143 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Mir7242-201ENSMUST00000183710 79 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm27786-201ENSMUST00000184337 70 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm44429-201ENSMUST00000203542 186 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm45288-201ENSMUST00000210236 151 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm24356-201ENSMUST00000082859 106 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm26494-201ENSMUST00000083154 143 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm24493-201ENSMUST00000083805 143 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.15□□□□□ -2.07
Mmp28Q8CGV8 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm24376-201ENSMUST00000104399 127 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm25539-201ENSMUST00000116886 122 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm13880-201ENSMUST00000118421 474 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm25805-201ENSMUST00000122788 108 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm23589-201ENSMUST00000157660 105 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm26411-201ENSMUST00000157668 107 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm26215-201ENSMUST00000158584 139 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm23141-201ENSMUST00000178682 94 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm27402-201ENSMUST00000183890 120 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm28358-202ENSMUST00000189292 223 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm2719-201ENSMUST00000191929 444 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm30534-201ENSMUST00000217928 207 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm46389-201ENSMUST00000223199 392 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 AC134860.6-201ENSMUST00000226038 285 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm23462-201ENSMUST00000083264 104 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Rny1-201ENSMUST00000083767 112 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Mmp28Q8CGV8 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.13□□□□□ -2.07
Mmp28Q8CGV8 Gm15102-201ENSMUST00000118740 1502 ntBASIC2.13□□□□□ -2.07
Mmp28Q8CGV8 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Mmp28Q8CGV8 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Mmp28Q8CGV8 Gm25943-201ENSMUST00000103791 90 ntBASIC2.13□□□□□ -2.07
Mmp28Q8CGV8 Mir466b-7-201ENSMUST00000103804 88 ntBASIC2.13□□□□□ -2.07
Mmp28Q8CGV8 Mir466b-5-201ENSMUST00000103900 88 ntBASIC2.13□□□□□ -2.07
Mmp28Q8CGV8 Gm24126-201ENSMUST00000104111 106 ntBASIC2.13□□□□□ -2.07
Mmp28Q8CGV8 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 153.8 ms