Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm44010-201ENSMUST00000204432 331 ntBASIC2.18□□□□□ -2.06
Ccdc28bQ8CEG5 Gm45005-201ENSMUST00000206640 157 ntBASIC2.18□□□□□ -2.06
Ccdc28bQ8CEG5 Gm44966-201ENSMUST00000208096 157 ntBASIC2.18□□□□□ -2.06
Ccdc28bQ8CEG5 Gm40810-201ENSMUST00000219149 253 ntBASIC2.18□□□□□ -2.06
Ccdc28bQ8CEG5 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.18□□□□□ -2.06
Ccdc28bQ8CEG5 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Ccdc28bQ8CEG5 Gm23055-201ENSMUST00000082805 94 ntBASIC2.18□□□□□ -2.06
Ccdc28bQ8CEG5 Gm22443-201ENSMUST00000082890 107 ntBASIC2.18□□□□□ -2.06
Ccdc28bQ8CEG5 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Ccdc28bQ8CEG5 Gm24374-201ENSMUST00000104394 106 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm25153-201ENSMUST00000157118 156 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm26215-201ENSMUST00000158584 139 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm25490-201ENSMUST00000158734 130 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm24878-201ENSMUST00000158782 104 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm25362-201ENSMUST00000158854 105 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm27505-201ENSMUST00000185071 110 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm29147-201ENSMUST00000186846 315 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm29227-201ENSMUST00000187139 315 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm29034-201ENSMUST00000188099 315 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm28160-201ENSMUST00000191229 315 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm2719-201ENSMUST00000191929 444 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm37129-201ENSMUST00000195791 315 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm44473-201ENSMUST00000204039 152 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm45313-201ENSMUST00000210584 178 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm19118-201ENSMUST00000222554 98 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm26314-201ENSMUST00000083891 107 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Gm26327-201ENSMUST00000093724 111 ntBASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Ccdc28bQ8CEG5 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm24984-201ENSMUST00000104454 133 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm12513-201ENSMUST00000118617 352 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm13443-201ENSMUST00000120770 555 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm11388-201ENSMUST00000120908 159 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm14402-201ENSMUST00000122217 508 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm26027-201ENSMUST00000122725 268 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm25460-201ENSMUST00000157954 127 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm24601-201ENSMUST00000157970 143 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm25866-201ENSMUST00000158245 112 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm24501-201ENSMUST00000158452 62 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm27997-201ENSMUST00000184942 69 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm5329-201ENSMUST00000186898 463 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm43250-201ENSMUST00000196536 273 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm43901-201ENSMUST00000203247 453 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm44938-201ENSMUST00000208614 427 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm22685-201ENSMUST00000082848 106 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm23453-201ENSMUST00000083326 106 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.16□□□□□ -2.06
Ccdc28bQ8CEG5 Gm13672-201ENSMUST00000117554 459 ntBASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Gm6071-201ENSMUST00000119561 440 ntBASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Gm23668-201ENSMUST00000157465 111 ntBASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Gm22675-201ENSMUST00000158430 104 ntBASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Mir3965-201ENSMUST00000175570 69 ntBASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Gm37923-201ENSMUST00000191624 161 ntBASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Gm42570-201ENSMUST00000195937 292 ntBASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Gm43286-201ENSMUST00000197420 424 ntBASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Gm45296-201ENSMUST00000209625 205 ntBASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Gm45452-201ENSMUST00000210905 177 ntBASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Gm7065-201ENSMUST00000222150 474 ntBASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Ccdc28bQ8CEG5 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm22270-201ENSMUST00000104034 132 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm26247-201ENSMUST00000116702 91 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm13378-201ENSMUST00000117483 336 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm24716-201ENSMUST00000157524 104 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm22447-201ENSMUST00000158155 92 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm22517-201ENSMUST00000158265 136 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm23852-201ENSMUST00000158376 77 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm23005-201ENSMUST00000158950 136 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm22093-201ENSMUST00000158980 111 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm23355-201ENSMUST00000177614 107 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm23977-201ENSMUST00000177871 74 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm23933-201ENSMUST00000178405 79 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm22951-201ENSMUST00000179471 107 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm26200-201ENSMUST00000180273 79 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm23148-201ENSMUST00000180367 107 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Mir7667-201ENSMUST00000183866 63 ntBASIC2.14□□□□□ -2.07
Ccdc28bQ8CEG5 Gm28848-201ENSMUST00000189984 168 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms