Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm43914-201ENSMUST00000203592 594 ntBASIC2.39□□□□□ -2.03
Nup88Q8CEC0 AC109214.2-201ENSMUST00000220089 358 ntBASIC2.39□□□□□ -2.03
Nup88Q8CEC0 Gm22062-201ENSMUST00000082563 107 ntBASIC2.39□□□□□ -2.03
Nup88Q8CEC0 n-R5s94-201ENSMUST00000082573 119 ntBASIC2.39□□□□□ -2.03
Nup88Q8CEC0 Gm23462-201ENSMUST00000083264 104 ntBASIC2.39□□□□□ -2.03
Nup88Q8CEC0 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.39□□□□□ -2.03
Nup88Q8CEC0 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.39□□□□□ -2.03
Nup88Q8CEC0 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.38□□□□□ -2.03
Nup88Q8CEC0 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Nup88Q8CEC0 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.38□□□□□ -2.03
Nup88Q8CEC0 Gm23246-201ENSMUST00000083371 67 ntBASIC2.38□□□□□ -2.03
Nup88Q8CEC0 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Nup88Q8CEC0 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Gm11420-201ENSMUST00000120047 402 ntBASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Gm13396-201ENSMUST00000120617 271 ntBASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Gm14972-201ENSMUST00000121780 364 ntBASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Trav20-201ENSMUST00000142754 347 ntBASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Gm22080-201ENSMUST00000157591 106 ntBASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Gm25933-201ENSMUST00000178943 108 ntBASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Gm26968-201ENSMUST00000182894 481 ntBASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Gm37579-201ENSMUST00000194291 142 ntBASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Gm43238-201ENSMUST00000196463 359 ntBASIC2.37□□□□□ -2.03
Nup88Q8CEC0 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Gm6109-201ENSMUST00000223297 348 ntBASIC2.37□□□□□ -2.03
Nup88Q8CEC0 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Gm26314-201ENSMUST00000083891 107 ntBASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Nup88Q8CEC0 Gm24282-201ENSMUST00000104232 66 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm25377-201ENSMUST00000104334 129 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm22678-201ENSMUST00000116974 101 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm25318-201ENSMUST00000122554 314 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm23670-201ENSMUST00000157469 119 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm22316-201ENSMUST00000158012 216 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm25434-201ENSMUST00000158278 167 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm24053-201ENSMUST00000158620 105 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm25488-201ENSMUST00000158728 118 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm23342-201ENSMUST00000158958 115 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Mir7016-201ENSMUST00000184308 72 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm27443-201ENSMUST00000184660 98 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Mir7017-201ENSMUST00000184894 62 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Mir6901-201ENSMUST00000185062 62 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm29005-201ENSMUST00000186773 320 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm42807-201ENSMUST00000200141 329 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm44811-201ENSMUST00000209120 228 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm5023-201ENSMUST00000217442 587 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm23404-201ENSMUST00000082543 97 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm22978-201ENSMUST00000082607 160 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm26126-201ENSMUST00000083188 164 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.36□□□□□ -2.03
Nup88Q8CEC0 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Gm26154-201ENSMUST00000102339 96 ntBASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Gm14574-201ENSMUST00000120644 279 ntBASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Gm15365-201ENSMUST00000122392 300 ntBASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Gm6956-201ENSMUST00000134724 546 ntBASIC2.35□□□□□ -2.03
Nup88Q8CEC0 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Gm26345-201ENSMUST00000157534 120 ntBASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Gm22113-201ENSMUST00000158343 104 ntBASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Gm24005-201ENSMUST00000158459 296 ntBASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Mir669n-201ENSMUST00000158636 54 ntBASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Mir6346-201ENSMUST00000183982 81 ntBASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Mir7225-201ENSMUST00000184178 54 ntBASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.35□□□□□ -2.03
Nup88Q8CEC0 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.35□□□□□ -2.03
Nup88Q8CEC0 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Gm25929-201ENSMUST00000082784 107 ntBASIC2.35□□□□□ -2.03
Nup88Q8CEC0 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
Nup88Q8CEC0 Gm26500-201ENSMUST00000101867 106 ntBASIC2.34□□□□□ -2.03
Nup88Q8CEC0 Gm15010-201ENSMUST00000117153 407 ntBASIC2.34□□□□□ -2.03
Nup88Q8CEC0 Snord11-201ENSMUST00000158468 84 ntBASIC2.34□□□□□ -2.03
Nup88Q8CEC0 Gm24573-201ENSMUST00000175499 112 ntBASIC2.34□□□□□ -2.03
Nup88Q8CEC0 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.34□□□□□ -2.03
Nup88Q8CEC0 Gm29229-201ENSMUST00000188874 323 ntBASIC2.34□□□□□ -2.03
Nup88Q8CEC0 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.34□□□□□ -2.03
Nup88Q8CEC0 Gm44938-201ENSMUST00000208614 427 ntBASIC2.34□□□□□ -2.03
Nup88Q8CEC0 Gm10264-201ENSMUST00000220589 429 ntBASIC2.34□□□□□ -2.03
Nup88Q8CEC0 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.34□□□□□ -2.03
Nup88Q8CEC0 AC154747.1-201ENSMUST00000225265 239 ntBASIC2.34□□□□□ -2.03
Nup88Q8CEC0 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.34□□□□□ -2.03
Nup88Q8CEC0 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.34□□□□□ -2.03
Nup88Q8CEC0 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.34□□□□□ -2.04
Nup88Q8CEC0 Gm23010-201ENSMUST00000104151 126 ntBASIC2.33□□□□□ -2.04
Nup88Q8CEC0 Gm25509-201ENSMUST00000116985 106 ntBASIC2.33□□□□□ -2.04
Nup88Q8CEC0 Gm11798-201ENSMUST00000119150 421 ntBASIC2.33□□□□□ -2.04
Nup88Q8CEC0 Gm24726-201ENSMUST00000158232 121 ntBASIC2.33□□□□□ -2.04
Nup88Q8CEC0 Gm43583-201ENSMUST00000199235 303 ntBASIC2.33□□□□□ -2.04
Nup88Q8CEC0 Gm44666-201ENSMUST00000208544 391 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 132.6 ms