Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Gm26500-201ENSMUST00000101867 106 ntBASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Gm24280-201ENSMUST00000104237 134 ntBASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Mir881-201ENSMUST00000104844 78 ntBASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Gm15466-201ENSMUST00000122299 333 ntBASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Gm23331-201ENSMUST00000157423 108 ntBASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Gm24601-201ENSMUST00000157970 143 ntBASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Gm17100-201ENSMUST00000168963 272 ntBASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Gm17166-201ENSMUST00000172006 431 ntBASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Gm5224-201ENSMUST00000183060 350 ntBASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Gm44337-201ENSMUST00000196553 114 ntBASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Gm43600-201ENSMUST00000202134 223 ntBASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Gm43901-201ENSMUST00000203247 453 ntBASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Gm44010-201ENSMUST00000204432 331 ntBASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Gm23453-201ENSMUST00000083326 106 ntBASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Trerf1Q8BXJ2 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Gm23911-201ENSMUST00000104596 134 ntBASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Gm16021-201ENSMUST00000121176 219 ntBASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Gm24908-201ENSMUST00000157294 127 ntBASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Gm26088-201ENSMUST00000157896 131 ntBASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Gm25373-201ENSMUST00000158156 115 ntBASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Mir6336-201ENSMUST00000183581 130 ntBASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Mir7014-201ENSMUST00000183853 63 ntBASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Gm27582-201ENSMUST00000184084 126 ntBASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Mir7081-201ENSMUST00000184490 75 ntBASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Gm27330-201ENSMUST00000184689 132 ntBASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Gm22249-201ENSMUST00000082485 136 ntBASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Snord104-201ENSMUST00000083192 70 ntBASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Trerf1Q8BXJ2 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Gm24582-201ENSMUST00000103967 103 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Gm11460-201ENSMUST00000118200 361 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Gm24629-201ENSMUST00000122762 89 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Gm23588-201ENSMUST00000157659 99 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Gm23476-201ENSMUST00000158881 274 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Gm20630-201ENSMUST00000177387 551 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Mir6917-201ENSMUST00000184111 61 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Gm27997-201ENSMUST00000184942 69 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Gm27700-201ENSMUST00000185003 81 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Gm44399-201ENSMUST00000205043 226 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Gm22685-201ENSMUST00000082848 106 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Gm23247-201ENSMUST00000083373 107 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Trerf1Q8BXJ2 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Gm12443-201ENSMUST00000122308 323 ntBASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Gm26412-201ENSMUST00000157666 55 ntBASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Gm23033-201ENSMUST00000157996 134 ntBASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Gm23759-201ENSMUST00000158351 268 ntBASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Mir7661-201ENSMUST00000197023 61 ntBASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Gm43583-201ENSMUST00000199235 303 ntBASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Trerf1Q8BXJ2 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.9□□□□□ -1.94
Trerf1Q8BXJ2 Gm25407-201ENSMUST00000104102 134 ntBASIC2.9□□□□□ -1.95
Trerf1Q8BXJ2 Gm13729-201ENSMUST00000120328 406 ntBASIC2.9□□□□□ -1.95
Trerf1Q8BXJ2 Gm13967-201ENSMUST00000120404 380 ntBASIC2.9□□□□□ -1.95
Trerf1Q8BXJ2 Gm25425-201ENSMUST00000157611 96 ntBASIC2.9□□□□□ -1.95
Trerf1Q8BXJ2 Gm4468-201ENSMUST00000170206 294 ntBASIC2.9□□□□□ -1.95
Trerf1Q8BXJ2 Gm25749-201ENSMUST00000175485 111 ntBASIC2.9□□□□□ -1.95
Trerf1Q8BXJ2 Gm28921-201ENSMUST00000190219 378 ntBASIC2.9□□□□□ -1.95
Trerf1Q8BXJ2 Gm37007-201ENSMUST00000194234 319 ntBASIC2.9□□□□□ -1.95
Trerf1Q8BXJ2 Gm45445-201ENSMUST00000209586 232 ntBASIC2.9□□□□□ -1.95
Trerf1Q8BXJ2 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.9□□□□□ -1.95
Trerf1Q8BXJ2 Gm22744-201ENSMUST00000083444 65 ntBASIC2.9□□□□□ -1.95
Trerf1Q8BXJ2 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Trerf1Q8BXJ2 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.89□□□□□ -1.95
Trerf1Q8BXJ2 Gm23705-201ENSMUST00000104370 130 ntBASIC2.89□□□□□ -1.95
Trerf1Q8BXJ2 Gm15002-201ENSMUST00000118406 452 ntBASIC2.89□□□□□ -1.95
Trerf1Q8BXJ2 Gm14402-201ENSMUST00000122217 508 ntBASIC2.89□□□□□ -1.95
Trerf1Q8BXJ2 Gm25390-201ENSMUST00000157341 103 ntBASIC2.89□□□□□ -1.95
Trerf1Q8BXJ2 Gm24846-201ENSMUST00000158033 108 ntBASIC2.89□□□□□ -1.95
Trerf1Q8BXJ2 Gm22381-201ENSMUST00000158186 107 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms