Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Gm18991-201ENSMUST00000209225 746 ntBASIC3.13□□□□□ -1.91
Ube3dQ8BX13 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Gm25204-201ENSMUST00000082843 106 ntBASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ube3dQ8BX13 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
Ube3dQ8BX13 Gm43046-201ENSMUST00000198771 2451 ntBASIC3.12□□□□□ -1.91
Ube3dQ8BX13 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.12□□□□□ -1.91
Ube3dQ8BX13 Gm22678-201ENSMUST00000116974 101 ntBASIC3.12□□□□□ -1.91
Ube3dQ8BX13 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.12□□□□□ -1.91
Ube3dQ8BX13 Gm23602-201ENSMUST00000157258 132 ntBASIC3.12□□□□□ -1.91
Ube3dQ8BX13 Gm25977-201ENSMUST00000158697 85 ntBASIC3.12□□□□□ -1.91
Ube3dQ8BX13 Gm17161-201ENSMUST00000169187 524 ntBASIC3.12□□□□□ -1.91
Ube3dQ8BX13 Mir7047-201ENSMUST00000184595 64 ntBASIC3.12□□□□□ -1.91
Ube3dQ8BX13 Gm29553-201ENSMUST00000189692 279 ntBASIC3.12□□□□□ -1.91
Ube3dQ8BX13 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC3.12□□□□□ -1.91
Ube3dQ8BX13 Gm45013-201ENSMUST00000206883 178 ntBASIC3.12□□□□□ -1.91
Ube3dQ8BX13 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.12□□□□□ -1.91
Ube3dQ8BX13 Snord15a-201ENSMUST00000083888 148 ntBASIC3.12□□□□□ -1.91
Ube3dQ8BX13 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ube3dQ8BX13 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Ube3dQ8BX13 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.11□□□□□ -1.91
Ube3dQ8BX13 AC153964.2-201ENSMUST00000217704 2474 ntBASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Gm12897-201ENSMUST00000120341 250 ntBASIC3.11□□□□□ -1.91
Ube3dQ8BX13 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Gm26005-201ENSMUST00000158802 134 ntBASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Gm17522-201ENSMUST00000178144 498 ntBASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ube3dQ8BX13 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Gm43899-201ENSMUST00000203675 246 ntBASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Gm18213-201ENSMUST00000207850 178 ntBASIC3.11□□□□□ -1.91
Ube3dQ8BX13 CT030687.1-201ENSMUST00000221854 162 ntBASIC3.11□□□□□ -1.91
Ube3dQ8BX13 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ube3dQ8BX13 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Ube3dQ8BX13 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Ube3dQ8BX13 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ube3dQ8BX13 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.1□□□□□ -1.91
Ube3dQ8BX13 Mir1934-201ENSMUST00000158127 83 ntBASIC3.1□□□□□ -1.91
Ube3dQ8BX13 Gm24314-201ENSMUST00000158274 123 ntBASIC3.1□□□□□ -1.91
Ube3dQ8BX13 Gm17020-201ENSMUST00000172274 274 ntBASIC3.1□□□□□ -1.91
Ube3dQ8BX13 Gm20613-201ENSMUST00000175828 345 ntBASIC3.1□□□□□ -1.91
Ube3dQ8BX13 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ube3dQ8BX13 Gm25933-201ENSMUST00000178943 108 ntBASIC3.1□□□□□ -1.91
Ube3dQ8BX13 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC3.1□□□□□ -1.91
Ube3dQ8BX13 Mir6914-201ENSMUST00000184999 69 ntBASIC3.1□□□□□ -1.91
Ube3dQ8BX13 Gm28344-201ENSMUST00000185704 279 ntBASIC3.1□□□□□ -1.91
Ube3dQ8BX13 Igkv1-115-201ENSMUST00000198714 302 ntBASIC3.1□□□□□ -1.91
Ube3dQ8BX13 AC164086.1-201ENSMUST00000221038 289 ntBASIC3.1□□□□□ -1.91
Ube3dQ8BX13 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC3.1□□□□□ -1.91
Ube3dQ8BX13 Gm22051-201ENSMUST00000117002 127 ntBASIC3.09□□□□□ -1.91
Ube3dQ8BX13 Gm13076-201ENSMUST00000118041 204 ntBASIC3.09□□□□□ -1.91
Ube3dQ8BX13 Gm15861-201ENSMUST00000120979 339 ntBASIC3.09□□□□□ -1.91
Ube3dQ8BX13 Gm23183-201ENSMUST00000122595 323 ntBASIC3.09□□□□□ -1.91
Ube3dQ8BX13 Gm24896-201ENSMUST00000122741 135 ntBASIC3.09□□□□□ -1.91
Ube3dQ8BX13 Gm24911-201ENSMUST00000157292 136 ntBASIC3.09□□□□□ -1.91
Ube3dQ8BX13 Gm22483-201ENSMUST00000157986 274 ntBASIC3.09□□□□□ -1.91
Ube3dQ8BX13 Gm22075-201ENSMUST00000158599 192 ntBASIC3.09□□□□□ -1.91
Ube3dQ8BX13 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC3.09□□□□□ -1.91
Ube3dQ8BX13 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Ube3dQ8BX13 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC3.09□□□□□ -1.91
Ube3dQ8BX13 Gm2189-201ENSMUST00000201419 429 ntBASIC3.09□□□□□ -1.91
Ube3dQ8BX13 Gm11351-202ENSMUST00000225724 478 ntBASIC3.09□□□□□ -1.91
Ube3dQ8BX13 Gm25895-201ENSMUST00000083714 100 ntBASIC3.09□□□□□ -1.91
Ube3dQ8BX13 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.09□□□□□ -1.91
Ube3dQ8BX13 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Ube3dQ8BX13 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Ube3dQ8BX13 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ube3dQ8BX13 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Mir291a-201ENSMUST00000104815 82 ntBASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Gm23326-201ENSMUST00000157419 105 ntBASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Gm23755-201ENSMUST00000157578 343 ntBASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Gm24008-201ENSMUST00000157733 138 ntBASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Gm26482-201ENSMUST00000158015 62 ntBASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Gm22606-201ENSMUST00000158290 103 ntBASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Gm26141-201ENSMUST00000175299 126 ntBASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Gm43749-201ENSMUST00000199345 352 ntBASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Gm43199-201ENSMUST00000200019 307 ntBASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Gm45080-201ENSMUST00000206648 283 ntBASIC3.08□□□□□ -1.92
Ube3dQ8BX13 Gm44564-201ENSMUST00000207985 180 ntBASIC3.08□□□□□ -1.92
Ube3dQ8BX13 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.08□□□□□ -1.92
Ube3dQ8BX13 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms