Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm44337-201ENSMUST00000196553 114 ntBASIC1.94□□□□□ -2.1
Nup54Q8BTS4 Gm25820-202ENSMUST00000197479 128 ntBASIC1.94□□□□□ -2.1
Nup54Q8BTS4 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.94□□□□□ -2.1
Nup54Q8BTS4 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.94□□□□□ -2.1
Nup54Q8BTS4 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.94□□□□□ -2.1
Nup54Q8BTS4 Gm23109-201ENSMUST00000116867 126 ntBASIC1.93□□□□□ -2.1
Nup54Q8BTS4 Gm15365-201ENSMUST00000122392 300 ntBASIC1.93□□□□□ -2.1
Nup54Q8BTS4 Gm25909-201ENSMUST00000157619 121 ntBASIC1.93□□□□□ -2.1
Nup54Q8BTS4 Gm25888-201ENSMUST00000157778 302 ntBASIC1.93□□□□□ -2.1
Nup54Q8BTS4 Gm24853-201ENSMUST00000158026 121 ntBASIC1.93□□□□□ -2.1
Nup54Q8BTS4 Mir6346-201ENSMUST00000183982 81 ntBASIC1.93□□□□□ -2.1
Nup54Q8BTS4 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC1.93□□□□□ -2.1
Nup54Q8BTS4 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC1.93□□□□□ -2.1
Nup54Q8BTS4 Gm45150-201ENSMUST00000206051 467 ntBASIC1.93□□□□□ -2.1
Nup54Q8BTS4 Gm34783-201ENSMUST00000209159 303 ntBASIC1.93□□□□□ -2.1
Nup54Q8BTS4 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Nup54Q8BTS4 Gm30155-201ENSMUST00000223458 339 ntBASIC1.93□□□□□ -2.1
Nup54Q8BTS4 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.93□□□□□ -2.1
Nup54Q8BTS4 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.93□□□□□ -2.1
Nup54Q8BTS4 n-R5s94-201ENSMUST00000082573 119 ntBASIC1.93□□□□□ -2.1
Nup54Q8BTS4 Gm22683-201ENSMUST00000082854 137 ntBASIC1.93□□□□□ -2.1
Nup54Q8BTS4 Gm22365-201ENSMUST00000093750 117 ntBASIC1.93□□□□□ -2.1
Nup54Q8BTS4 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Nup54Q8BTS4 Gm18360-201ENSMUST00000173327 1524 ntBASIC1.92□□□□□ -2.1
Nup54Q8BTS4 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Nup54Q8BTS4 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Gm22316-201ENSMUST00000158012 216 ntBASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Gm25996-201ENSMUST00000175393 117 ntBASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Gm24573-201ENSMUST00000175499 112 ntBASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Mir6406-201ENSMUST00000183592 120 ntBASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Mir6399-201ENSMUST00000184050 84 ntBASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Gm37399-201ENSMUST00000195224 416 ntBASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Gm43512-201ENSMUST00000198495 176 ntBASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Gm44938-201ENSMUST00000208614 427 ntBASIC1.92□□□□□ -2.1
Nup54Q8BTS4 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Nup54Q8BTS4 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Mir466f-2-201ENSMUST00000104805 94 ntBASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm25827-201ENSMUST00000157089 107 ntBASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm24726-201ENSMUST00000158232 121 ntBASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Mir669n-201ENSMUST00000158636 54 ntBASIC1.91□□□□□ -2.1
Nup54Q8BTS4 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm43676-201ENSMUST00000197532 540 ntBASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm43431-201ENSMUST00000198577 340 ntBASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Trav15n-3-201ENSMUST00000200498 168 ntBASIC1.91□□□□□ -2.1
Nup54Q8BTS4 AC164117.2-201ENSMUST00000222090 327 ntBASIC1.91□□□□□ -2.1
Nup54Q8BTS4 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm25813-201ENSMUST00000082748 191 ntBASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm26126-201ENSMUST00000083188 164 ntBASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm26164-201ENSMUST00000083793 104 ntBASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
Nup54Q8BTS4 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.9□□□□□ -2.1
Nup54Q8BTS4 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
Nup54Q8BTS4 Mir758-201ENSMUST00000103260 81 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm42606-201ENSMUST00000114209 239 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm7953-201ENSMUST00000168278 469 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm17100-201ENSMUST00000168963 272 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm25933-201ENSMUST00000178943 108 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Mir7678-201ENSMUST00000185076 71 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm29397-201ENSMUST00000185205 333 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm37162-201ENSMUST00000191708 551 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm43238-201ENSMUST00000196463 359 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm44429-201ENSMUST00000203542 186 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 AC154296.2-201ENSMUST00000214696 545 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 CT009713.9-201ENSMUST00000223604 389 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm25578-201ENSMUST00000083406 104 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Mir181a-1-201ENSMUST00000083631 87 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm26314-201ENSMUST00000083891 107 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Nup54Q8BTS4 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.89□□□□□ -2.11
Nup54Q8BTS4 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms