Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Mir653-201ENSMUST00000102402 85 ntBASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Gm25068-201ENSMUST00000103895 110 ntBASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Gm22771-201ENSMUST00000104449 91 ntBASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Gm13457-201ENSMUST00000117885 267 ntBASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Gm23170-201ENSMUST00000157158 106 ntBASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Gm24191-201ENSMUST00000157977 122 ntBASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Gm22315-201ENSMUST00000158010 143 ntBASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Gm22803-201ENSMUST00000158049 283 ntBASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Gm25371-201ENSMUST00000158162 101 ntBASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Mir6352-201ENSMUST00000184495 116 ntBASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Mir6419-201ENSMUST00000184784 113 ntBASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Gm9156-201ENSMUST00000189660 463 ntBASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Gm45907-201ENSMUST00000213023 193 ntBASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Ccdc40Q8BI79 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 Gm23950-201ENSMUST00000104026 129 ntBASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 Gm26396-201ENSMUST00000104093 132 ntBASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 Gm14355-201ENSMUST00000117352 264 ntBASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 Gm23854-201ENSMUST00000158378 108 ntBASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 Gm24677-201ENSMUST00000158755 150 ntBASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 Gm25936-201ENSMUST00000179952 114 ntBASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 Gm43512-201ENSMUST00000198495 176 ntBASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 Gm7495-201ENSMUST00000215099 426 ntBASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 Gm26457-201ENSMUST00000082678 78 ntBASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
Ccdc40Q8BI79 Gm14766-201ENSMUST00000121689 367 ntBASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 Gm23411-201ENSMUST00000157988 62 ntBASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 Gm22665-201ENSMUST00000158720 275 ntBASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 Gm27517-201ENSMUST00000184347 236 ntBASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 Gm28453-203ENSMUST00000187041 189 ntBASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 Gm28383-201ENSMUST00000187563 139 ntBASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 Gm29262-201ENSMUST00000190084 196 ntBASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 Gm18696-201ENSMUST00000220103 274 ntBASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 Gm16976-205ENSMUST00000227324 226 ntBASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.68□□□□□ -2.14
Ccdc40Q8BI79 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm22193-201ENSMUST00000116868 76 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm14943-201ENSMUST00000118056 546 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm12417-201ENSMUST00000119153 403 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm22841-201ENSMUST00000158443 62 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm18185-201ENSMUST00000186725 667 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm29005-201ENSMUST00000186773 320 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm28648-201ENSMUST00000190092 343 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm34073-201ENSMUST00000195736 212 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm43035-201ENSMUST00000197626 517 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm5034-201ENSMUST00000199115 634 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm45150-201ENSMUST00000206051 467 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm44654-201ENSMUST00000208052 329 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm19441-201ENSMUST00000221545 330 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 AC112972.1-201ENSMUST00000227329 365 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Snord118-201ENSMUST00000082965 135 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm24406-201ENSMUST00000083026 128 ntBASIC1.67□□□□□ -2.14
Ccdc40Q8BI79 Gm11606-201ENSMUST00000120706 617 ntBASIC1.66□□□□□ -2.14
Ccdc40Q8BI79 Snord13-201ENSMUST00000157627 104 ntBASIC1.66□□□□□ -2.14
Ccdc40Q8BI79 Gm24229-201ENSMUST00000158830 118 ntBASIC1.66□□□□□ -2.14
Ccdc40Q8BI79 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ccdc40Q8BI79 Gm9830-201ENSMUST00000178509 357 ntBASIC1.66□□□□□ -2.14
Ccdc40Q8BI79 Mir6406-201ENSMUST00000183592 120 ntBASIC1.66□□□□□ -2.14
Ccdc40Q8BI79 Gm27248-201ENSMUST00000184004 166 ntBASIC1.66□□□□□ -2.14
Ccdc40Q8BI79 Gm28912-201ENSMUST00000189001 234 ntBASIC1.66□□□□□ -2.14
Ccdc40Q8BI79 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.66□□□□□ -2.14
Ccdc40Q8BI79 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.66□□□□□ -2.14
Ccdc40Q8BI79 AC124542.1-201ENSMUST00000205588 908 ntBASIC1.66□□□□□ -2.14
Ccdc40Q8BI79 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
Ccdc40Q8BI79 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Ccdc40Q8BI79 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.66□□□□□ -2.14
Ccdc40Q8BI79 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
Ccdc40Q8BI79 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.65□□□□□ -2.14
Ccdc40Q8BI79 Gm23015-201ENSMUST00000104145 128 ntBASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 Gm13714-201ENSMUST00000117313 221 ntBASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 Gm22027-201ENSMUST00000122737 127 ntBASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 Gm26150-201ENSMUST00000157426 151 ntBASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 Gm26181-201ENSMUST00000157687 106 ntBASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 Gm22308-201ENSMUST00000177609 107 ntBASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 Mir7j-201ENSMUST00000184427 122 ntBASIC1.65□□□□□ -2.15
Ccdc40Q8BI79 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms