Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm9850-201ENSMUST00000117916 227 ntBASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 Gm11794-201ENSMUST00000119446 237 ntBASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 Gm25012-201ENSMUST00000158396 164 ntBASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 Gm22951-201ENSMUST00000179471 107 ntBASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 Gm27747-201ENSMUST00000184707 85 ntBASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 Gm37007-201ENSMUST00000194234 319 ntBASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 Gm44425-201ENSMUST00000203739 429 ntBASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 Gm25199-201ENSMUST00000083095 104 ntBASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 Gm26107-201ENSMUST00000083972 107 ntBASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.68□□□□□ -1.98
Ubfd1Q78JW9 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 AC160115.1-201ENSMUST00000224678 1574 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm15526-201ENSMUST00000112504 204 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm14774-201ENSMUST00000117857 536 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm16171-201ENSMUST00000118004 324 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm14602-201ENSMUST00000118625 340 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm8260-201ENSMUST00000119230 353 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm22330-201ENSMUST00000158068 115 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm25476-201ENSMUST00000175125 185 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm23977-201ENSMUST00000177871 74 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm21827-201ENSMUST00000178247 423 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Mir7013-201ENSMUST00000183540 72 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm27786-201ENSMUST00000184337 70 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm29167-201ENSMUST00000190024 377 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Trbv6-201ENSMUST00000193743 276 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm45452-201ENSMUST00000210905 177 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 AC160984.2-201ENSMUST00000224927 791 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm42770-201ENSMUST00000199657 4155 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Ubfd1Q78JW9 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 Mir875-201ENSMUST00000104698 78 ntBASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 Gm22713-201ENSMUST00000116895 130 ntBASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 Gm14215-201ENSMUST00000120578 221 ntBASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 Gm25362-201ENSMUST00000158854 105 ntBASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 Gm27527-201ENSMUST00000183903 99 ntBASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 Gm22294-201ENSMUST00000083308 104 ntBASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Ubfd1Q78JW9 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.98
Ubfd1Q78JW9 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
Ubfd1Q78JW9 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.98
Ubfd1Q78JW9 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 Gm15365-201ENSMUST00000122392 300 ntBASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 Gm26105-201ENSMUST00000157253 190 ntBASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 Gm37807-201ENSMUST00000194310 190 ntBASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 Gm18991-201ENSMUST00000209225 746 ntBASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Ubfd1Q78JW9 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.64□□□□□ -1.99
Ubfd1Q78JW9 Gm22678-201ENSMUST00000116974 101 ntBASIC2.64□□□□□ -1.99
Ubfd1Q78JW9 Gm13714-201ENSMUST00000117313 221 ntBASIC2.64□□□□□ -1.99
Ubfd1Q78JW9 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Ubfd1Q78JW9 Gm26186-201ENSMUST00000157689 125 ntBASIC2.64□□□□□ -1.99
Ubfd1Q78JW9 Gm22675-201ENSMUST00000158430 104 ntBASIC2.64□□□□□ -1.99
Ubfd1Q78JW9 Gm20718-201ENSMUST00000176058 259 ntBASIC2.64□□□□□ -1.99
Ubfd1Q78JW9 Gm29658-201ENSMUST00000185404 230 ntBASIC2.64□□□□□ -1.99
Ubfd1Q78JW9 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.64□□□□□ -1.99
Ubfd1Q78JW9 Gm29818-201ENSMUST00000218070 165 ntBASIC2.64□□□□□ -1.99
Ubfd1Q78JW9 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.64□□□□□ -1.99
Ubfd1Q78JW9 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.64□□□□□ -1.99
Ubfd1Q78JW9 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 140.3 ms