Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC0.35□□□□□ -2.35
Topbp1Q6ZQF0 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
Topbp1Q6ZQF0 Gm24282-201ENSMUST00000104232 66 ntBASIC0.35□□□□□ -2.35
Topbp1Q6ZQF0 Gm11813-201ENSMUST00000118586 291 ntBASIC0.35□□□□□ -2.35
Topbp1Q6ZQF0 Gm15167-201ENSMUST00000121997 187 ntBASIC0.35□□□□□ -2.35
Topbp1Q6ZQF0 Gm25543-201ENSMUST00000122678 312 ntBASIC0.35□□□□□ -2.35
Topbp1Q6ZQF0 Gm22800-201ENSMUST00000175627 94 ntBASIC0.35□□□□□ -2.35
Topbp1Q6ZQF0 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC0.35□□□□□ -2.35
Topbp1Q6ZQF0 Gm27420-201ENSMUST00000183823 79 ntBASIC0.35□□□□□ -2.35
Topbp1Q6ZQF0 Gm19709-201ENSMUST00000215403 482 ntBASIC0.35□□□□□ -2.35
Topbp1Q6ZQF0 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC0.35□□□□□ -2.35
Topbp1Q6ZQF0 AC154552.4-201ENSMUST00000222171 151 ntBASIC0.35□□□□□ -2.35
Topbp1Q6ZQF0 Gm25138-201ENSMUST00000083248 136 ntBASIC0.35□□□□□ -2.35
Topbp1Q6ZQF0 Mir33-201ENSMUST00000083531 69 ntBASIC0.35□□□□□ -2.35
Topbp1Q6ZQF0 Gm45912-201ENSMUST00000210646 543 ntBASIC0.34□□□□□ -2.35
Topbp1Q6ZQF0 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.34□□□□□ -2.35
Topbp1Q6ZQF0 Gm14600-201ENSMUST00000121032 630 ntBASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Gm24388-201ENSMUST00000177872 107 ntBASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Gm42647-201ENSMUST00000195939 459 ntBASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Gm45101-201ENSMUST00000208327 232 ntBASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Gm46103-201ENSMUST00000217614 341 ntBASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 AC152979.4-201ENSMUST00000219893 379 ntBASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 AC147633.1-201ENSMUST00000225134 259 ntBASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Gm23956-201ENSMUST00000157211 119 ntBASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Gm23370-201ENSMUST00000199545 130 ntBASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Gm20102-201ENSMUST00000222445 220 ntBASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Gm9795-201ENSMUST00000062156 693 ntBASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.33□□□□□ -2.36
Topbp1Q6ZQF0 Gm12889-201ENSMUST00000118684 241 ntBASIC0.32□□□□□ -2.36
Topbp1Q6ZQF0 Gm12045-201ENSMUST00000122122 573 ntBASIC0.32□□□□□ -2.36
Topbp1Q6ZQF0 Gm26000-201ENSMUST00000157991 107 ntBASIC0.32□□□□□ -2.36
Topbp1Q6ZQF0 Gm20438-201ENSMUST00000174441 329 ntBASIC0.32□□□□□ -2.36
Topbp1Q6ZQF0 Gm26365-201ENSMUST00000179177 94 ntBASIC0.32□□□□□ -2.36
Topbp1Q6ZQF0 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.32□□□□□ -2.36
Topbp1Q6ZQF0 Gm27717-201ENSMUST00000183933 151 ntBASIC0.32□□□□□ -2.36
Topbp1Q6ZQF0 Gm9236-201ENSMUST00000196892 587 ntBASIC0.32□□□□□ -2.36
Topbp1Q6ZQF0 Gm42925-201ENSMUST00000197359 285 ntBASIC0.32□□□□□ -2.36
Topbp1Q6ZQF0 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.32□□□□□ -2.36
Topbp1Q6ZQF0 Gm45965-201ENSMUST00000221192 1284 ntBASIC0.32□□□□□ -2.36
Topbp1Q6ZQF0 AC124772.1-201ENSMUST00000221325 151 ntBASIC0.32□□□□□ -2.36
Topbp1Q6ZQF0 AC139294.2-201ENSMUST00000227159 285 ntBASIC0.32□□□□□ -2.36
Topbp1Q6ZQF0 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.32□□□□□ -2.36
Topbp1Q6ZQF0 Gm19428-201ENSMUST00000220512 1995 ntBASIC0.31□□□□□ -2.36
Topbp1Q6ZQF0 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.31□□□□□ -2.36
Topbp1Q6ZQF0 Gm23656-201ENSMUST00000122626 112 ntBASIC0.31□□□□□ -2.36
Topbp1Q6ZQF0 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC0.31□□□□□ -2.36
Topbp1Q6ZQF0 Gm26102-201ENSMUST00000157251 284 ntBASIC0.31□□□□□ -2.36
Topbp1Q6ZQF0 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.31□□□□□ -2.36
Topbp1Q6ZQF0 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.31□□□□□ -2.36
Topbp1Q6ZQF0 AC158606.1-201ENSMUST00000220078 325 ntBASIC0.31□□□□□ -2.36
Topbp1Q6ZQF0 DQ267101-201ENSMUST00000082562 73 ntBASIC0.31□□□□□ -2.36
Topbp1Q6ZQF0 Gm23741-201ENSMUST00000097237 171 ntBASIC0.31□□□□□ -2.36
Topbp1Q6ZQF0 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
Topbp1Q6ZQF0 Gm12825-201ENSMUST00000120249 563 ntBASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 Gm13246-201ENSMUST00000120994 315 ntBASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 Gm11575-201ENSMUST00000122243 228 ntBASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 Gm25108-201ENSMUST00000122473 78 ntBASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 Gm24839-201ENSMUST00000122602 107 ntBASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 Gm26484-201ENSMUST00000158018 106 ntBASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 Gm22510-201ENSMUST00000179304 79 ntBASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 Gm26336-201ENSMUST00000179449 79 ntBASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 Gm26390-201ENSMUST00000179628 79 ntBASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 AL669916.3-201ENSMUST00000213855 94 ntBASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 AL669916.6-201ENSMUST00000214610 94 ntBASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 AL669916.4-201ENSMUST00000215976 94 ntBASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 AL669916.1-201ENSMUST00000217640 94 ntBASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 Gm18696-201ENSMUST00000220103 274 ntBASIC0.3□□□□□ -2.36
Topbp1Q6ZQF0 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.29□□□□□ -2.36
Topbp1Q6ZQF0 Gm12304-201ENSMUST00000120312 385 ntBASIC0.29□□□□□ -2.36
Topbp1Q6ZQF0 Gm25663-201ENSMUST00000157698 135 ntBASIC0.29□□□□□ -2.36
Topbp1Q6ZQF0 Gm25371-201ENSMUST00000158162 101 ntBASIC0.29□□□□□ -2.36
Topbp1Q6ZQF0 Gm20415-201ENSMUST00000172877 423 ntBASIC0.29□□□□□ -2.36
Topbp1Q6ZQF0 Mir6335-201ENSMUST00000184081 98 ntBASIC0.29□□□□□ -2.36
Topbp1Q6ZQF0 AC154552.5-201ENSMUST00000222352 207 ntBASIC0.29□□□□□ -2.36
Topbp1Q6ZQF0 Gm25589-201ENSMUST00000082502 166 ntBASIC0.29□□□□□ -2.36
Topbp1Q6ZQF0 AC163660.3-201ENSMUST00000224253 1563 ntBASIC0.29□□□□□ -2.36
Topbp1Q6ZQF0 Gm14358-201ENSMUST00000118458 403 ntBASIC0.28□□□□□ -2.36
Topbp1Q6ZQF0 Gm14937-201ENSMUST00000119709 208 ntBASIC0.28□□□□□ -2.36
Topbp1Q6ZQF0 Gm15193-201ENSMUST00000120224 865 ntBASIC0.28□□□□□ -2.36
Topbp1Q6ZQF0 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.28□□□□□ -2.36
Topbp1Q6ZQF0 Gm22477-201ENSMUST00000122569 316 ntBASIC0.28□□□□□ -2.36
Topbp1Q6ZQF0 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Topbp1Q6ZQF0 Gm25059-201ENSMUST00000157367 117 ntBASIC0.28□□□□□ -2.36
Topbp1Q6ZQF0 Gm26968-201ENSMUST00000182894 481 ntBASIC0.28□□□□□ -2.36
Topbp1Q6ZQF0 Gm27861-201ENSMUST00000183920 214 ntBASIC0.28□□□□□ -2.36
Topbp1Q6ZQF0 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.28□□□□□ -2.36
Topbp1Q6ZQF0 Gm37599-201ENSMUST00000193067 489 ntBASIC0.28□□□□□ -2.36
Topbp1Q6ZQF0 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Topbp1Q6ZQF0 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms