Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm23183-201ENSMUST00000122595 323 ntBASIC3.14□□□□□ -1.91
Ddx55Q6ZPL9 Gm22227-201ENSMUST00000157356 259 ntBASIC3.14□□□□□ -1.91
Ddx55Q6ZPL9 Gm25454-201ENSMUST00000157947 315 ntBASIC3.14□□□□□ -1.91
Ddx55Q6ZPL9 Gm23258-201ENSMUST00000158319 106 ntBASIC3.14□□□□□ -1.91
Ddx55Q6ZPL9 Gm24878-201ENSMUST00000158782 104 ntBASIC3.14□□□□□ -1.91
Ddx55Q6ZPL9 Gm29140-201ENSMUST00000190187 476 ntBASIC3.14□□□□□ -1.91
Ddx55Q6ZPL9 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Ddx55Q6ZPL9 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.14□□□□□ -1.91
Ddx55Q6ZPL9 Gm43264-201ENSMUST00000202284 325 ntBASIC3.14□□□□□ -1.91
Ddx55Q6ZPL9 Gm22622-201ENSMUST00000082870 129 ntBASIC3.14□□□□□ -1.91
Ddx55Q6ZPL9 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ddx55Q6ZPL9 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ddx55Q6ZPL9 Gm14971-201ENSMUST00000117980 663 ntBASIC3.13□□□□□ -1.91
Ddx55Q6ZPL9 Gm23895-201ENSMUST00000158108 160 ntBASIC3.13□□□□□ -1.91
Ddx55Q6ZPL9 Gm22527-201ENSMUST00000158816 106 ntBASIC3.13□□□□□ -1.91
Ddx55Q6ZPL9 Gm24415-201ENSMUST00000180218 107 ntBASIC3.13□□□□□ -1.91
Ddx55Q6ZPL9 Gm27694-201ENSMUST00000184740 86 ntBASIC3.13□□□□□ -1.91
Ddx55Q6ZPL9 Gm37007-201ENSMUST00000194234 319 ntBASIC3.13□□□□□ -1.91
Ddx55Q6ZPL9 Mir3068-202ENSMUST00000197755 79 ntBASIC3.13□□□□□ -1.91
Ddx55Q6ZPL9 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.13□□□□□ -1.91
Ddx55Q6ZPL9 Gm45013-201ENSMUST00000206883 178 ntBASIC3.13□□□□□ -1.91
Ddx55Q6ZPL9 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Ddx55Q6ZPL9 AC173482.4-201ENSMUST00000225096 348 ntBASIC3.13□□□□□ -1.91
Ddx55Q6ZPL9 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ddx55Q6ZPL9 Gm9795-201ENSMUST00000062156 693 ntBASIC3.13□□□□□ -1.91
Ddx55Q6ZPL9 CT025538.3-201ENSMUST00000225279 3848 ntBASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Gm23202-201ENSMUST00000104376 129 ntBASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Gm25565-201ENSMUST00000104605 105 ntBASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Gm13714-201ENSMUST00000117313 221 ntBASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Gm12954-201ENSMUST00000118610 611 ntBASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Gm13992-201ENSMUST00000120558 156 ntBASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Gm25805-201ENSMUST00000122788 108 ntBASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Gm26200-201ENSMUST00000180273 79 ntBASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Gm27470-201ENSMUST00000184070 210 ntBASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Igkv1-108-201ENSMUST00000198926 298 ntBASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Gm6796-201ENSMUST00000211919 243 ntBASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Gm26458-201ENSMUST00000082832 128 ntBASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Gm24356-201ENSMUST00000082859 106 ntBASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Gm22294-201ENSMUST00000083308 104 ntBASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Mir127-201ENSMUST00000093568 70 ntBASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.12□□□□□ -1.91
Ddx55Q6ZPL9 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.11□□□□□ -1.91
Ddx55Q6ZPL9 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC3.11□□□□□ -1.91
Ddx55Q6ZPL9 Gm22961-201ENSMUST00000157964 106 ntBASIC3.11□□□□□ -1.91
Ddx55Q6ZPL9 Gm22315-201ENSMUST00000158010 143 ntBASIC3.11□□□□□ -1.91
Ddx55Q6ZPL9 Gm23476-201ENSMUST00000158881 274 ntBASIC3.11□□□□□ -1.91
Ddx55Q6ZPL9 Gm25476-201ENSMUST00000175125 185 ntBASIC3.11□□□□□ -1.91
Ddx55Q6ZPL9 Gm37089-201ENSMUST00000195616 129 ntBASIC3.11□□□□□ -1.91
Ddx55Q6ZPL9 Gm19563-201ENSMUST00000222031 270 ntBASIC3.11□□□□□ -1.91
Ddx55Q6ZPL9 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Ddx55Q6ZPL9 Gm24698-201ENSMUST00000083883 130 ntBASIC3.11□□□□□ -1.91
Ddx55Q6ZPL9 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Gm24116-201ENSMUST00000103975 107 ntBASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Gm14069-201ENSMUST00000120815 229 ntBASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Gm5396-201ENSMUST00000121222 532 ntBASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Gm23589-201ENSMUST00000157660 105 ntBASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Gm25333-201ENSMUST00000158035 246 ntBASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Gm24818-201ENSMUST00000175093 161 ntBASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Mir3075-201ENSMUST00000175340 85 ntBASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Gm22118-201ENSMUST00000175593 171 ntBASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Gm44429-201ENSMUST00000203542 186 ntBASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
Ddx55Q6ZPL9 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Mir1b-201ENSMUST00000117012 122 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Gm14803-201ENSMUST00000117163 361 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Gm12686-201ENSMUST00000120546 397 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Gm12155-201ENSMUST00000121267 160 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Gm22984-201ENSMUST00000122751 122 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Gm22192-201ENSMUST00000175128 85 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Mir6336-201ENSMUST00000183581 130 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Gm27582-201ENSMUST00000184084 126 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Trbv6-201ENSMUST00000193743 276 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Gm37428-201ENSMUST00000193886 137 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Gm44476-201ENSMUST00000196225 91 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Gm5899-201ENSMUST00000071770 270 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Gm25632-201ENSMUST00000083112 85 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Gm23247-201ENSMUST00000083373 107 ntBASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Ddx55Q6ZPL9 AC102369.2-201ENSMUST00000219725 1679 ntBASIC3.08□□□□□ -1.92
Ddx55Q6ZPL9 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ddx55Q6ZPL9 Gm43256-201ENSMUST00000199995 3091 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms