Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Gm20257-202ENSMUST00000188643 130 ntBASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Mir3069-201ENSMUST00000198802 65 ntBASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Gm44654-201ENSMUST00000208052 329 ntBASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Smarca1Q6PGB8 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 Gm22486-201ENSMUST00000116815 137 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 Gm11859-201ENSMUST00000118099 455 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 Gm22598-201ENSMUST00000157600 127 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 Gm23779-201ENSMUST00000157938 64 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 Mir6951-201ENSMUST00000183910 75 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 Gm27959-201ENSMUST00000185172 111 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 Gm28995-201ENSMUST00000186625 261 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 Gm28744-201ENSMUST00000189939 340 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 Gm44063-201ENSMUST00000203307 376 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 CT025602.1-201ENSMUST00000227281 382 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 Gm23412-201ENSMUST00000083017 107 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 Gm23249-201ENSMUST00000083369 161 ntBASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Smarca1Q6PGB8 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Gm22713-201ENSMUST00000116895 130 ntBASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Gm14307-201ENSMUST00000118930 291 ntBASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Gm14297-201ENSMUST00000129110 291 ntBASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Gm16362-201ENSMUST00000135189 214 ntBASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Gm16358-201ENSMUST00000146046 210 ntBASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Gm25888-201ENSMUST00000157778 302 ntBASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Gm23642-201ENSMUST00000157858 258 ntBASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Gm25711-201ENSMUST00000158633 128 ntBASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Gm27991-201ENSMUST00000184804 137 ntBASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Gm28418-201ENSMUST00000186179 423 ntBASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Gm37404-201ENSMUST00000195726 359 ntBASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.6□□□□□ -1.99
Smarca1Q6PGB8 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
Smarca1Q6PGB8 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Smarca1Q6PGB8 Gm24049-201ENSMUST00000102409 100 ntBASIC2.59□□□□□ -1.99
Smarca1Q6PGB8 Gm11254-201ENSMUST00000122368 653 ntBASIC2.59□□□□□ -1.99
Smarca1Q6PGB8 Gm25059-201ENSMUST00000157367 117 ntBASIC2.59□□□□□ -1.99
Smarca1Q6PGB8 Gm24348-201ENSMUST00000158710 130 ntBASIC2.59□□□□□ -1.99
Smarca1Q6PGB8 Gm25933-201ENSMUST00000178943 108 ntBASIC2.59□□□□□ -1.99
Smarca1Q6PGB8 Gm43676-201ENSMUST00000197532 540 ntBASIC2.59□□□□□ -1.99
Smarca1Q6PGB8 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.59□□□□□ -1.99
Smarca1Q6PGB8 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.59□□□□□ -1.99
Smarca1Q6PGB8 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.59□□□□□ -1.99
Smarca1Q6PGB8 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.59□□□□□ -1.99
Smarca1Q6PGB8 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Smarca1Q6PGB8 Gm26500-201ENSMUST00000101867 106 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 Mir872-201ENSMUST00000104728 81 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 Gm24937-201ENSMUST00000122597 134 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.58□□□□□ -2
Smarca1Q6PGB8 Gm22947-201ENSMUST00000158559 91 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 Gm24053-201ENSMUST00000158620 105 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 Gm24573-201ENSMUST00000175499 112 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 Gm26200-201ENSMUST00000180273 79 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 Gm44477-201ENSMUST00000199661 110 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2.58□□□□□ -2
Smarca1Q6PGB8 Gm19572-201ENSMUST00000214326 338 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 Gm22978-201ENSMUST00000082607 160 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 Gm22685-201ENSMUST00000082848 106 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 Gm26126-201ENSMUST00000083188 164 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.58□□□□□ -2
Smarca1Q6PGB8 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Smarca1Q6PGB8 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.57□□□□□ -2
Smarca1Q6PGB8 Gm26280-201ENSMUST00000157096 101 ntBASIC2.57□□□□□ -2
Smarca1Q6PGB8 Gm24480-201ENSMUST00000157442 103 ntBASIC2.57□□□□□ -2
Smarca1Q6PGB8 Gm22264-201ENSMUST00000178200 107 ntBASIC2.57□□□□□ -2
Smarca1Q6PGB8 Gm24799-201ENSMUST00000178431 79 ntBASIC2.57□□□□□ -2
Smarca1Q6PGB8 Mir6376-201ENSMUST00000185149 131 ntBASIC2.57□□□□□ -2
Smarca1Q6PGB8 Gm28257-201ENSMUST00000185244 463 ntBASIC2.57□□□□□ -2
Smarca1Q6PGB8 Gm45522-201ENSMUST00000210784 166 ntBASIC2.57□□□□□ -2
Smarca1Q6PGB8 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.57□□□□□ -2
Smarca1Q6PGB8 Gm6109-201ENSMUST00000223297 348 ntBASIC2.57□□□□□ -2
Smarca1Q6PGB8 Gm25589-201ENSMUST00000082502 166 ntBASIC2.57□□□□□ -2
Smarca1Q6PGB8 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.57□□□□□ -2
Smarca1Q6PGB8 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 182.6 ms