Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 CT485612.4-201ENSMUST00000223405 250 ntBASIC0.49□□□□□ -2.33
Nup98Q6PFD9 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.49□□□□□ -2.33
Nup98Q6PFD9 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
Nup98Q6PFD9 Gm12016-201ENSMUST00000119079 681 ntBASIC0.48□□□□□ -2.33
Nup98Q6PFD9 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.48□□□□□ -2.33
Nup98Q6PFD9 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.48□□□□□ -2.33
Nup98Q6PFD9 Ighv2-8-201ENSMUST00000193935 262 ntBASIC0.48□□□□□ -2.33
Nup98Q6PFD9 Gm10264-201ENSMUST00000220589 429 ntBASIC0.48□□□□□ -2.33
Nup98Q6PFD9 AC151902.1-201ENSMUST00000227800 375 ntBASIC0.48□□□□□ -2.33
Nup98Q6PFD9 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
Nup98Q6PFD9 Gm23924-201ENSMUST00000082474 108 ntBASIC0.48□□□□□ -2.33
Nup98Q6PFD9 Snora41-201ENSMUST00000082668 132 ntBASIC0.48□□□□□ -2.33
Nup98Q6PFD9 Gm23645-201ENSMUST00000083228 108 ntBASIC0.48□□□□□ -2.33
Nup98Q6PFD9 Mir29b-2-201ENSMUST00000083478 81 ntBASIC0.48□□□□□ -2.33
Nup98Q6PFD9 Gm4732-201ENSMUST00000118778 473 ntBASIC0.48□□□□□ -2.33
Nup98Q6PFD9 Gm12045-201ENSMUST00000122122 573 ntBASIC0.48□□□□□ -2.33
Nup98Q6PFD9 Gm23206-201ENSMUST00000122720 184 ntBASIC0.48□□□□□ -2.33
Nup98Q6PFD9 Gm20613-201ENSMUST00000175828 345 ntBASIC0.48□□□□□ -2.33
Nup98Q6PFD9 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC0.48□□□□□ -2.33
Nup98Q6PFD9 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
Nup98Q6PFD9 Gm6272-201ENSMUST00000121256 171 ntBASIC0.47□□□□□ -2.33
Nup98Q6PFD9 Gm25325-201ENSMUST00000122559 86 ntBASIC0.47□□□□□ -2.33
Nup98Q6PFD9 Gm22233-201ENSMUST00000157464 114 ntBASIC0.47□□□□□ -2.33
Nup98Q6PFD9 Gm24747-201ENSMUST00000157835 87 ntBASIC0.47□□□□□ -2.33
Nup98Q6PFD9 Gm25868-201ENSMUST00000158253 114 ntBASIC0.47□□□□□ -2.33
Nup98Q6PFD9 Rnu7-201ENSMUST00000158458 62 ntBASIC0.47□□□□□ -2.33
Nup98Q6PFD9 Gm20438-201ENSMUST00000174441 329 ntBASIC0.47□□□□□ -2.33
Nup98Q6PFD9 Gm24366-201ENSMUST00000175383 86 ntBASIC0.47□□□□□ -2.33
Nup98Q6PFD9 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.47□□□□□ -2.33
Nup98Q6PFD9 Gm43026-201ENSMUST00000202972 325 ntBASIC0.47□□□□□ -2.33
Nup98Q6PFD9 AC156795.1-201ENSMUST00000214655 414 ntBASIC0.47□□□□□ -2.33
Nup98Q6PFD9 Gm18696-201ENSMUST00000220103 274 ntBASIC0.47□□□□□ -2.33
Nup98Q6PFD9 Gm26207-201ENSMUST00000082909 104 ntBASIC0.47□□□□□ -2.33
Nup98Q6PFD9 Mir216a-201ENSMUST00000083605 72 ntBASIC0.47□□□□□ -2.33
Nup98Q6PFD9 Gm23848-201ENSMUST00000083826 106 ntBASIC0.47□□□□□ -2.33
Nup98Q6PFD9 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.46□□□□□ -2.34
Nup98Q6PFD9 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.46□□□□□ -2.34
Nup98Q6PFD9 Gm37599-201ENSMUST00000193067 489 ntBASIC0.46□□□□□ -2.34
Nup98Q6PFD9 Gm45912-201ENSMUST00000210646 543 ntBASIC0.46□□□□□ -2.34
Nup98Q6PFD9 Gm45878-201ENSMUST00000211839 241 ntBASIC0.46□□□□□ -2.34
Nup98Q6PFD9 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.46□□□□□ -2.34
Nup98Q6PFD9 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC0.46□□□□□ -2.34
Nup98Q6PFD9 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.46□□□□□ -2.34
Nup98Q6PFD9 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
Nup98Q6PFD9 Gm25059-201ENSMUST00000157367 117 ntBASIC0.45□□□□□ -2.34
Nup98Q6PFD9 Gm23538-201ENSMUST00000157535 101 ntBASIC0.45□□□□□ -2.34
Nup98Q6PFD9 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.45□□□□□ -2.34
Nup98Q6PFD9 Gm43432-201ENSMUST00000196352 121 ntBASIC0.45□□□□□ -2.34
Nup98Q6PFD9 Gm2829-201ENSMUST00000213121 499 ntBASIC0.45□□□□□ -2.34
Nup98Q6PFD9 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Nup98Q6PFD9 Gm15177-201ENSMUST00000120491 577 ntBASIC0.45□□□□□ -2.34
Nup98Q6PFD9 Gm22221-201ENSMUST00000157362 103 ntBASIC0.45□□□□□ -2.34
Nup98Q6PFD9 Gm23589-201ENSMUST00000157660 105 ntBASIC0.45□□□□□ -2.34
Nup98Q6PFD9 Gm24388-201ENSMUST00000177872 107 ntBASIC0.45□□□□□ -2.34
Nup98Q6PFD9 Gm23370-201ENSMUST00000199545 130 ntBASIC0.45□□□□□ -2.34
Nup98Q6PFD9 Gm22974-201ENSMUST00000083301 103 ntBASIC0.45□□□□□ -2.34
Nup98Q6PFD9 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.45□□□□□ -2.34
Nup98Q6PFD9 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Gm23749-201ENSMUST00000104223 131 ntBASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Gm12449-201ENSMUST00000117572 234 ntBASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Gm11219-201ENSMUST00000118565 358 ntBASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Gm25914-201ENSMUST00000157618 153 ntBASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Gm8114-201ENSMUST00000172225 484 ntBASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Mir3089-201ENSMUST00000175350 84 ntBASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Gm23090-201ENSMUST00000177331 78 ntBASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Mir6364-201ENSMUST00000183396 86 ntBASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Gm28912-201ENSMUST00000189001 234 ntBASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.44□□□□□ -2.34
Nup98Q6PFD9 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC0.44□□□□□ -2.34
Nup98Q6PFD9 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Gm24622-201ENSMUST00000082619 162 ntBASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.44□□□□□ -2.34
Nup98Q6PFD9 Gm14761-201ENSMUST00000121363 262 ntBASIC0.43□□□□□ -2.34
Nup98Q6PFD9 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Nup98Q6PFD9 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.43□□□□□ -2.34
Nup98Q6PFD9 Gm29490-201ENSMUST00000190923 342 ntBASIC0.43□□□□□ -2.34
Nup98Q6PFD9 Gm44989-201ENSMUST00000204749 217 ntBASIC0.43□□□□□ -2.34
Nup98Q6PFD9 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC0.43□□□□□ -2.34
Nup98Q6PFD9 Gm24610-201ENSMUST00000083270 109 ntBASIC0.43□□□□□ -2.34
Nup98Q6PFD9 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.43□□□□□ -2.34
Nup98Q6PFD9 Gm24282-201ENSMUST00000104232 66 ntBASIC0.43□□□□□ -2.34
Nup98Q6PFD9 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.43□□□□□ -2.34
Nup98Q6PFD9 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.43□□□□□ -2.34
Nup98Q6PFD9 Gm26150-201ENSMUST00000157426 151 ntBASIC0.43□□□□□ -2.34
Nup98Q6PFD9 Gm24401-201ENSMUST00000157868 91 ntBASIC0.43□□□□□ -2.34
Nup98Q6PFD9 Spanxn4-201ENSMUST00000172433 424 ntBASIC0.43□□□□□ -2.34
Nup98Q6PFD9 Gm29600-201ENSMUST00000188687 377 ntBASIC0.43□□□□□ -2.34
Nup98Q6PFD9 Gm5955-201ENSMUST00000222712 219 ntBASIC0.43□□□□□ -2.34
Nup98Q6PFD9 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.43□□□□□ -2.34
Nup98Q6PFD9 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.43□□□□□ -2.34
Nup98Q6PFD9 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC0.42□□□□□ -2.34
Nup98Q6PFD9 Gm25371-201ENSMUST00000158162 101 ntBASIC0.42□□□□□ -2.34
Nup98Q6PFD9 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
Nup98Q6PFD9 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.42□□□□□ -2.34
Nup98Q6PFD9 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.42□□□□□ -2.34
Nup98Q6PFD9 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.42□□□□□ -2.34
Nup98Q6PFD9 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.42□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms