Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm22843-201ENSMUST00000157710 134 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm22554-201ENSMUST00000157798 147 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm23409-201ENSMUST00000158516 237 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm22416-201ENSMUST00000158590 88 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm25711-201ENSMUST00000158633 128 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm25119-201ENSMUST00000158815 88 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm25020-201ENSMUST00000178071 107 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm27330-201ENSMUST00000184689 132 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm43669-201ENSMUST00000198229 436 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm43587-201ENSMUST00000199590 204 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm42807-201ENSMUST00000200141 329 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm23377-201ENSMUST00000082943 126 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm24044-201ENSMUST00000083107 156 ntBASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Snrnp40Q6PE01 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Mir701-201ENSMUST00000102208 109 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm26154-201ENSMUST00000102339 96 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm22486-201ENSMUST00000116815 137 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm13439-201ENSMUST00000117541 409 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm12042-201ENSMUST00000120479 301 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm23589-201ENSMUST00000157660 105 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm22803-201ENSMUST00000158049 283 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm25956-201ENSMUST00000175115 217 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm24085-201ENSMUST00000175172 116 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm43406-201ENSMUST00000200356 334 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm44419-201ENSMUST00000203338 229 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm43914-201ENSMUST00000203592 594 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm2829-201ENSMUST00000213121 499 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm33654-201ENSMUST00000221704 215 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm21937-201ENSMUST00000222825 218 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm46389-201ENSMUST00000223199 392 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm26457-201ENSMUST00000082678 78 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm23462-201ENSMUST00000083264 104 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm23851-201ENSMUST00000083831 103 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
Snrnp40Q6PE01 Gm25094-201ENSMUST00000103992 131 ntBASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 Gm23950-201ENSMUST00000104026 129 ntBASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 Gm26077-201ENSMUST00000104064 123 ntBASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 Gm9059-201ENSMUST00000118319 183 ntBASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 Gm12235-201ENSMUST00000118596 170 ntBASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 Gm12924-201ENSMUST00000121747 318 ntBASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 Gm23600-201ENSMUST00000157260 71 ntBASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 Gm25888-201ENSMUST00000157778 302 ntBASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 Gm23033-201ENSMUST00000157996 134 ntBASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 Gm24053-201ENSMUST00000158620 105 ntBASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 Gm3852-201ENSMUST00000182781 264 ntBASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 Gm43035-201ENSMUST00000197626 517 ntBASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Snrnp40Q6PE01 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Gm24590-201ENSMUST00000116699 119 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Gm22678-201ENSMUST00000116974 101 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Gm23670-201ENSMUST00000157469 119 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Gm26400-201ENSMUST00000175012 85 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Gm22800-201ENSMUST00000175627 94 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Mir7026-201ENSMUST00000184384 67 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Gm28016-201ENSMUST00000184594 196 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Mir7017-201ENSMUST00000184894 62 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Gm28408-201ENSMUST00000191557 463 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Gm37889-201ENSMUST00000194174 251 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Gm44337-201ENSMUST00000196553 114 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Gm43512-201ENSMUST00000198495 176 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Gm44063-201ENSMUST00000203307 376 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Gm23453-201ENSMUST00000083326 106 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Mir222-201ENSMUST00000083537 79 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Gm25896-201ENSMUST00000083713 136 ntBASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.1□□□□□ -2.07
Snrnp40Q6PE01 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Gm25269-201ENSMUST00000122601 104 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Gm23214-201ENSMUST00000122716 157 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Gm16362-201ENSMUST00000135189 214 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Gm16358-201ENSMUST00000146046 210 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Gm22101-201ENSMUST00000157928 103 ntBASIC2.09□□□□□ -2.07
Snrnp40Q6PE01 Gm7592-201ENSMUST00000160674 627 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 196.2 ms