Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.88□□□□□ -1.95
Rnf220Q6PDX6 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC2.88□□□□□ -1.95
Rnf220Q6PDX6 Mir6907-201ENSMUST00000183764 71 ntBASIC2.88□□□□□ -1.95
Rnf220Q6PDX6 Gm27694-201ENSMUST00000184740 86 ntBASIC2.88□□□□□ -1.95
Rnf220Q6PDX6 Mir1291-201ENSMUST00000199842 117 ntBASIC2.88□□□□□ -1.95
Rnf220Q6PDX6 Snora34-201ENSMUST00000083402 138 ntBASIC2.88□□□□□ -1.95
Rnf220Q6PDX6 Gm23847-201ENSMUST00000083829 110 ntBASIC2.88□□□□□ -1.95
Rnf220Q6PDX6 Gm23039-201ENSMUST00000083870 161 ntBASIC2.88□□□□□ -1.95
Rnf220Q6PDX6 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Rnf220Q6PDX6 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Gm24792-201ENSMUST00000104286 128 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Gm23841-201ENSMUST00000116951 114 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Gm13076-201ENSMUST00000118041 204 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Gm25115-201ENSMUST00000157187 140 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Mir28b-201ENSMUST00000175399 80 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Gm20613-201ENSMUST00000175828 345 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Gm25817-201ENSMUST00000177758 121 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Gm24766-201ENSMUST00000179182 121 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Gm24415-201ENSMUST00000180218 107 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Ighv12-2-201ENSMUST00000191949 362 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Gm32175-201ENSMUST00000193641 346 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Gm24204-201ENSMUST00000082950 107 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.87□□□□□ -1.95
Rnf220Q6PDX6 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Gm15162-201ENSMUST00000119325 283 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Gm12042-201ENSMUST00000120479 301 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Gm24936-201ENSMUST00000122598 247 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Gm24006-201ENSMUST00000158462 132 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Mir1936-201ENSMUST00000158699 93 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Gm24304-201ENSMUST00000177635 107 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Gm25615-201ENSMUST00000177836 94 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Mir6385-201ENSMUST00000184295 105 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Gm27330-201ENSMUST00000184689 132 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Gm28627-201ENSMUST00000186141 453 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Gm29553-201ENSMUST00000189692 279 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Gm42834-201ENSMUST00000196845 256 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Gm45907-201ENSMUST00000213023 193 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 CT954323.1-201ENSMUST00000222774 229 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Gm24625-201ENSMUST00000082622 130 ntBASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Rnf220Q6PDX6 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 Gm25420-201ENSMUST00000104216 127 ntBASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 n-R5s87-201ENSMUST00000122752 116 ntBASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 Gm24745-201ENSMUST00000157840 85 ntBASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 Gm23892-201ENSMUST00000158105 130 ntBASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 Gm22532-201ENSMUST00000158822 140 ntBASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 Mir5710-201ENSMUST00000176884 69 ntBASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 Mir8096-201ENSMUST00000184526 127 ntBASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 Gm42672-201ENSMUST00000197821 352 ntBASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 Gm44666-201ENSMUST00000208544 391 ntBASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 AC132465.3-201ENSMUST00000219326 195 ntBASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
Rnf220Q6PDX6 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Gm26341-201ENSMUST00000104561 134 ntBASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Gm12417-201ENSMUST00000119153 403 ntBASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Gm13443-201ENSMUST00000120770 555 ntBASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Gm7209-201ENSMUST00000122339 333 ntBASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Gm25519-201ENSMUST00000158392 127 ntBASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Ang-ps2-201ENSMUST00000178173 433 ntBASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Gm27421-201ENSMUST00000184729 167 ntBASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Gm17966-201ENSMUST00000193453 594 ntBASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Gm44182-201ENSMUST00000204052 115 ntBASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Gm45245-201ENSMUST00000210082 376 ntBASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Gm19118-201ENSMUST00000222554 98 ntBASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.84□□□□□ -1.95
Rnf220Q6PDX6 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.83□□□□□ -1.96
Rnf220Q6PDX6 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Rnf220Q6PDX6 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Rnf220Q6PDX6 Gm25421-201ENSMUST00000104218 164 ntBASIC2.83□□□□□ -1.96
Rnf220Q6PDX6 Gm23530-201ENSMUST00000104564 137 ntBASIC2.83□□□□□ -1.96
Rnf220Q6PDX6 Gm23492-201ENSMUST00000116837 115 ntBASIC2.83□□□□□ -1.96
Rnf220Q6PDX6 Gm12143-201ENSMUST00000119666 332 ntBASIC2.83□□□□□ -1.96
Rnf220Q6PDX6 Gm22281-201ENSMUST00000157198 103 ntBASIC2.83□□□□□ -1.96
Rnf220Q6PDX6 Gm26100-201ENSMUST00000157245 127 ntBASIC2.83□□□□□ -1.96
Rnf220Q6PDX6 Gm22483-201ENSMUST00000157986 274 ntBASIC2.83□□□□□ -1.96
Rnf220Q6PDX6 Mir1934-201ENSMUST00000158127 83 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 430.2 ms