| Runx3 | Q64131 | Gm28831-201 | ENSMUST00000187739 | 315 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm28200-201 | ENSMUST00000187778 | 315 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm28752-201 | ENSMUST00000188340 | 315 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm29378-201 | ENSMUST00000188723 | 315 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm28569-201 | ENSMUST00000188748 | 315 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm28120-201 | ENSMUST00000188812 | 315 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm28369-201 | ENSMUST00000188993 | 315 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm29037-201 | ENSMUST00000189092 | 313 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Scgb1b1-ps-201 | ENSMUST00000189264 | 268 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm28909-201 | ENSMUST00000189406 | 315 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm28861-201 | ENSMUST00000189681 | 315 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm29180-201 | ENSMUST00000190003 | 315 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm29575-201 | ENSMUST00000190597 | 315 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm28951-201 | ENSMUST00000190742 | 313 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm29469-201 | ENSMUST00000191448 | 315 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm37162-201 | ENSMUST00000191708 | 551 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Mucl2-201 | ENSMUST00000037685 | 639 nt | APPRIS P2 TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Defb40-201 | ENSMUST00000066258 | 389 nt | APPRIS P1 TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm22685-201 | ENSMUST00000082848 | 106 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Olfr1437-202 | ENSMUST00000207241 | 3751 nt | APPRIS P1 TSL 2 BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | 4930524B17Rik-201 | ENSMUST00000200755 | 1870 nt | TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Gm10400-201 | ENSMUST00000203920 | 3835 nt | BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Olfr1487-204 | ENSMUST00000216688 | 2038 nt | TSL 5 BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Tlr3-201 | ENSMUST00000034056 | 4407 nt | APPRIS P1 TSL 1 (best) BASIC | 2.22 | □□□□□ -2.05 | | |
| Runx3 | Q64131 | Vmn2r72-201 | ENSMUST00000063425 | 2571 nt | APPRIS P1 TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm24582-201 | ENSMUST00000103967 | 103 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm23011-201 | ENSMUST00000104148 | 132 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm11854-201 | ENSMUST00000117839 | 446 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm14402-201 | ENSMUST00000122217 | 508 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm16355-201 | ENSMUST00000128606 | 231 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm24237-201 | ENSMUST00000157790 | 132 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Vmn2r-ps65-201 | ENSMUST00000173309 | 220 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm22114-201 | ENSMUST00000177756 | 107 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Mir7026-201 | ENSMUST00000184384 | 67 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm31415-201 | ENSMUST00000194963 | 344 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm42570-201 | ENSMUST00000195937 | 292 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm43512-201 | ENSMUST00000198495 | 176 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm43680-201 | ENSMUST00000199466 | 340 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm44989-201 | ENSMUST00000204749 | 217 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm8940-201 | ENSMUST00000212585 | 219 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | 4930567K20Rik-204 | ENSMUST00000220270 | 445 nt | TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | CT030166.2-201 | ENSMUST00000222021 | 368 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | 1700010L04Rik-201 | ENSMUST00000032872 | 330 nt | TSL 5 BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm25896-201 | ENSMUST00000083713 | 136 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm26314-201 | ENSMUST00000083891 | 107 nt | BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Cyp3a59-201 | ENSMUST00000035571 | 1990 nt | APPRIS P1 TSL 1 (best) BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm7145-201 | ENSMUST00000185381 | 1794 nt | APPRIS P1 TSL 3 BASIC | 2.21 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm43373-201 | ENSMUST00000202552 | 2870 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Hif1a-202 | ENSMUST00000110461 | 4385 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm24835-201 | ENSMUST00000116777 | 111 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm6444-201 | ENSMUST00000119611 | 458 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | n-R5s159-201 | ENSMUST00000122681 | 120 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Dnal1-203 | ENSMUST00000136159 | 403 nt | TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm24601-201 | ENSMUST00000157970 | 143 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm24769-201 | ENSMUST00000158506 | 129 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm22093-201 | ENSMUST00000158980 | 111 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm23933-201 | ENSMUST00000178405 | 79 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm29665-201 | ENSMUST00000191457 | 528 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Igkv1-108-201 | ENSMUST00000198926 | 298 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm45150-201 | ENSMUST00000206051 | 467 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm40810-201 | ENSMUST00000219149 | 253 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | AC123860.1-201 | ENSMUST00000228033 | 481 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm24661-201 | ENSMUST00000083205 | 104 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm23247-201 | ENSMUST00000083373 | 107 nt | BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Olfr1039-203 | ENSMUST00000216566 | 4166 nt | APPRIS P1 TSL 5 BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Olfr1477-202 | ENSMUST00000217001 | 4000 nt | APPRIS P1 TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Olfr24-203 | ENSMUST00000216754 | 4327 nt | APPRIS P1 TSL 2 BASIC | 2.2 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Olfr726-204 | ENSMUST00000215105 | 1752 nt | APPRIS P1 TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Vmn1r75-206 | ENSMUST00000228463 | 6508 nt | APPRIS P2 BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm23941-201 | ENSMUST00000101953 | 107 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Mir542-201 | ENSMUST00000102186 | 85 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm24282-201 | ENSMUST00000104232 | 66 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm11460-201 | ENSMUST00000118200 | 361 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm15211-201 | ENSMUST00000118932 | 528 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm13588-201 | ENSMUST00000120026 | 135 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm14883-201 | ENSMUST00000120179 | 157 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Defa-ps8-201 | ENSMUST00000120972 | 279 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm23331-201 | ENSMUST00000157423 | 108 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm8292-201 | ENSMUST00000162574 | 396 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm25956-201 | ENSMUST00000175115 | 217 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Mir6353-201 | ENSMUST00000183596 | 113 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm38127-201 | ENSMUST00000191978 | 468 nt | TSL 5 BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm43583-201 | ENSMUST00000199235 | 303 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm44655-201 | ENSMUST00000207768 | 423 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | AC133156.1-202 | ENSMUST00000227284 | 363 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm26447-201 | ENSMUST00000082448 | 129 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm23625-201 | ENSMUST00000082457 | 100 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Mir125b-2-201 | ENSMUST00000083538 | 71 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm43753-201 | ENSMUST00000196539 | 3309 nt | BASIC | 2.19 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Ifi203-201 | ENSMUST00000042228 | 3754 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.18 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm26280-201 | ENSMUST00000157096 | 101 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm24858-201 | ENSMUST00000158058 | 323 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm24900-201 | ENSMUST00000158128 | 134 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm23921-201 | ENSMUST00000175258 | 107 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm3952-201 | ENSMUST00000195093 | 573 nt | APPRIS P1 TSL 5 BASIC | 2.18 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm43562-201 | ENSMUST00000196439 | 238 nt | TSL 3 BASIC | 2.18 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm44337-201 | ENSMUST00000196553 | 114 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Mir7661-201 | ENSMUST00000197023 | 61 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm42739-201 | ENSMUST00000200687 | 226 nt | BASIC | 2.18 | □□□□□ -2.06 | | |
| Runx3 | Q64131 | Gm44010-201 | ENSMUST00000204432 | 331 nt | BASIC | 2.18 | □□□□□ -2.06 | | |