Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC-0.02□□□□□ -2.41
Col7a1Q63870 Ighv2-8-201ENSMUST00000193935 262 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm43007-201ENSMUST00000197618 291 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm44128-201ENSMUST00000204909 219 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm19709-201ENSMUST00000215403 482 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 CT030194.2-201ENSMUST00000225752 379 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Snord85-201ENSMUST00000083262 73 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC-0.02□□□□□ -2.41
Col7a1Q63870 Gm14917-201ENSMUST00000118872 2105 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 n-R5s157-201ENSMUST00000122543 121 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm23656-201ENSMUST00000122626 112 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm24716-201ENSMUST00000157524 104 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Snord11-201ENSMUST00000158468 84 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm24823-201ENSMUST00000175092 91 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm23617-201ENSMUST00000175410 95 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm27365-201ENSMUST00000184041 177 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm37869-201ENSMUST00000193385 595 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm45815-201ENSMUST00000220241 146 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 AC123062.1-201ENSMUST00000221287 481 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 CT009733.1-203ENSMUST00000224033 451 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 AC173482.4-201ENSMUST00000225096 348 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm25136-201ENSMUST00000083253 115 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm12080-201ENSMUST00000119821 1883 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 AC127302.3-201ENSMUST00000215480 2791 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Traj29-201ENSMUST00000103712 60 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm14774-201ENSMUST00000117857 536 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm22755-201ENSMUST00000157143 100 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm23601-201ENSMUST00000157259 131 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm24678-201ENSMUST00000158756 104 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Sult3a2-201ENSMUST00000165904 882 ntAPPRIS P1 TSL 5 BASIC-0.03□□□□□ -2.41
Col7a1Q63870 Mir145b-201ENSMUST00000184434 75 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm19891-201ENSMUST00000189771 303 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm43531-201ENSMUST00000200676 1114 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm18774-201ENSMUST00000218269 601 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm24494-201ENSMUST00000083804 81 ntBASIC-0.03□□□□□ -2.41
Col7a1Q63870 Gm14554-201ENSMUST00000119548 661 ntBASIC-0.03□□□□□ -2.42
Col7a1Q63870 Gm11606-201ENSMUST00000120706 617 ntBASIC-0.03□□□□□ -2.42
Col7a1Q63870 Gm14129-201ENSMUST00000122436 291 ntBASIC-0.03□□□□□ -2.42
Col7a1Q63870 Gm25323-201ENSMUST00000122555 103 ntBASIC-0.03□□□□□ -2.42
Col7a1Q63870 n-R5s192-201ENSMUST00000122577 119 ntBASIC-0.03□□□□□ -2.42
Col7a1Q63870 n-R5s216-201ENSMUST00000122755 112 ntBASIC-0.03□□□□□ -2.42
Col7a1Q63870 Gm22338-201ENSMUST00000157715 129 ntBASIC-0.03□□□□□ -2.42
Col7a1Q63870 Gm24009-201ENSMUST00000157734 93 ntBASIC-0.03□□□□□ -2.42
Col7a1Q63870 Gm23704-201ENSMUST00000158844 340 ntBASIC-0.03□□□□□ -2.42
Col7a1Q63870 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC-0.03□□□□□ -2.42
Col7a1Q63870 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.42
Col7a1Q63870 Gm28000-201ENSMUST00000184380 85 ntBASIC-0.03□□□□□ -2.42
Col7a1Q63870 Gm29661-201ENSMUST00000186781 315 ntBASIC-0.03□□□□□ -2.42
Col7a1Q63870 Gm29308-201ENSMUST00000188863 315 ntBASIC-0.03□□□□□ -2.42
Col7a1Q63870 Gm28191-201ENSMUST00000189112 211 ntBASIC-0.03□□□□□ -2.42
Col7a1Q63870 Gm45730-201ENSMUST00000212560 395 ntBASIC-0.03□□□□□ -2.42
Col7a1Q63870 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC-0.03□□□□□ -2.42
Col7a1Q63870 Gm43924-201ENSMUST00000204851 1736 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm26081-201ENSMUST00000104068 132 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 n-R5s171-201ENSMUST00000104128 79 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm11893-201ENSMUST00000117829 491 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm15223-201ENSMUST00000120989 826 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm22027-201ENSMUST00000122737 127 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm24584-201ENSMUST00000157972 107 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC-0.04□□□□□ -2.42
Col7a1Q63870 Mir3964-201ENSMUST00000174898 74 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm25211-201ENSMUST00000177553 107 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm25671-201ENSMUST00000178612 105 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm21830-201ENSMUST00000178898 135 ntAPPRIS P1 TSL 5 BASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm25101-201ENSMUST00000179057 107 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm23307-201ENSMUST00000179167 105 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm25286-201ENSMUST00000179790 105 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm25173-201ENSMUST00000179794 107 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm44336-201ENSMUST00000203696 468 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm45912-201ENSMUST00000210646 543 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 AC160863.1-201ENSMUST00000218412 317 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 CT030662.3-201ENSMUST00000228751 476 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm26054-201ENSMUST00000083037 107 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm26324-201ENSMUST00000083073 107 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm26127-201ENSMUST00000083193 107 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 n-R5s153-201ENSMUST00000083451 116 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm23732-201ENSMUST00000083751 107 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm23851-201ENSMUST00000083831 103 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm22352-201ENSMUST00000083917 107 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm26051-201ENSMUST00000104642 93 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm24725-201ENSMUST00000158229 125 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm17655-201ENSMUST00000167969 255 ntBASIC-0.04□□□□□ -2.42
Col7a1Q63870 Gm28435-201ENSMUST00000185496 108 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms