Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.34□□□□□ -2.03
Trim27Q62158 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Trim27Q62158 Gm25589-201ENSMUST00000082502 166 ntBASIC2.34□□□□□ -2.03
Trim27Q62158 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.34□□□□□ -2.04
Trim27Q62158 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trim27Q62158 Mir669d-201ENSMUST00000104644 121 ntBASIC2.33□□□□□ -2.04
Trim27Q62158 Gm22713-201ENSMUST00000116895 130 ntBASIC2.33□□□□□ -2.04
Trim27Q62158 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.33□□□□□ -2.04
Trim27Q62158 Gm22113-201ENSMUST00000158343 104 ntBASIC2.33□□□□□ -2.04
Trim27Q62158 Gm23548-201ENSMUST00000158963 106 ntBASIC2.33□□□□□ -2.04
Trim27Q62158 Gm26180-201ENSMUST00000179942 107 ntBASIC2.33□□□□□ -2.04
Trim27Q62158 Gm23186-201ENSMUST00000180078 107 ntBASIC2.33□□□□□ -2.04
Trim27Q62158 Gm27959-201ENSMUST00000185172 111 ntBASIC2.33□□□□□ -2.04
Trim27Q62158 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC2.33□□□□□ -2.04
Trim27Q62158 Gm44533-201ENSMUST00000207782 268 ntBASIC2.33□□□□□ -2.04
Trim27Q62158 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.33□□□□□ -2.04
Trim27Q62158 Gm5023-201ENSMUST00000217442 587 ntBASIC2.33□□□□□ -2.04
Trim27Q62158 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trim27Q62158 Snord68-201ENSMUST00000082516 86 ntBASIC2.33□□□□□ -2.04
Trim27Q62158 Gm25788-201ENSMUST00000082721 131 ntBASIC2.33□□□□□ -2.04
Trim27Q62158 Gm26056-201ENSMUST00000083043 104 ntBASIC2.33□□□□□ -2.04
Trim27Q62158 Gm23242-201ENSMUST00000083055 107 ntBASIC2.33□□□□□ -2.04
Trim27Q62158 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Trim27Q62158 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trim27Q62158 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.32□□□□□ -2.04
Trim27Q62158 Mir7093-201ENSMUST00000184195 101 ntBASIC2.32□□□□□ -2.04
Trim27Q62158 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.32□□□□□ -2.04
Trim27Q62158 Gm43676-201ENSMUST00000197532 540 ntBASIC2.32□□□□□ -2.04
Trim27Q62158 Gm3724-201ENSMUST00000197957 349 ntBASIC2.32□□□□□ -2.04
Trim27Q62158 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC2.32□□□□□ -2.04
Trim27Q62158 Gm44149-201ENSMUST00000204256 226 ntBASIC2.32□□□□□ -2.04
Trim27Q62158 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.32□□□□□ -2.04
Trim27Q62158 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim27Q62158 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.32□□□□□ -2.04
Trim27Q62158 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trim27Q62158 Gm19194-201ENSMUST00000192015 3774 ntBASIC2.31□□□□□ -2.04
Trim27Q62158 Gm23011-201ENSMUST00000104148 132 ntBASIC2.31□□□□□ -2.04
Trim27Q62158 Gm22073-201ENSMUST00000122668 189 ntBASIC2.31□□□□□ -2.04
Trim27Q62158 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.31□□□□□ -2.04
Trim27Q62158 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.31□□□□□ -2.04
Trim27Q62158 Gm23120-201ENSMUST00000157654 287 ntBASIC2.31□□□□□ -2.04
Trim27Q62158 Gm24726-201ENSMUST00000158232 121 ntBASIC2.31□□□□□ -2.04
Trim27Q62158 Gm25368-201ENSMUST00000158847 131 ntBASIC2.31□□□□□ -2.04
Trim27Q62158 Gm28058-201ENSMUST00000186421 264 ntBASIC2.31□□□□□ -2.04
Trim27Q62158 Gm28848-201ENSMUST00000189984 168 ntBASIC2.31□□□□□ -2.04
Trim27Q62158 Gm18617-201ENSMUST00000222311 259 ntBASIC2.31□□□□□ -2.04
Trim27Q62158 Gm23721-201ENSMUST00000083005 107 ntBASIC2.31□□□□□ -2.04
Trim27Q62158 Gm22365-201ENSMUST00000093750 117 ntBASIC2.31□□□□□ -2.04
Trim27Q62158 Gm26077-201ENSMUST00000104064 123 ntBASIC2.3□□□□□ -2.04
Trim27Q62158 Gm15215-201ENSMUST00000117773 489 ntBASIC2.3□□□□□ -2.04
Trim27Q62158 Gm13729-201ENSMUST00000120328 406 ntBASIC2.3□□□□□ -2.04
Trim27Q62158 Gm25115-201ENSMUST00000157187 140 ntBASIC2.3□□□□□ -2.04
Trim27Q62158 Gm20462-201ENSMUST00000172623 408 ntBASIC2.3□□□□□ -2.04
Trim27Q62158 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.3□□□□□ -2.04
Trim27Q62158 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trim27Q62158 Gm28211-201ENSMUST00000190920 315 ntBASIC2.3□□□□□ -2.04
Trim27Q62158 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.3□□□□□ -2.04
Trim27Q62158 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.3□□□□□ -2.04
Trim27Q62158 Gm22683-201ENSMUST00000082854 137 ntBASIC2.3□□□□□ -2.04
Trim27Q62158 Mir322-201ENSMUST00000083484 95 ntBASIC2.3□□□□□ -2.04
Trim27Q62158 Gm42606-201ENSMUST00000114209 239 ntBASIC2.29□□□□□ -2.04
Trim27Q62158 Gm13439-201ENSMUST00000117541 409 ntBASIC2.29□□□□□ -2.04
Trim27Q62158 Trav20-201ENSMUST00000142754 347 ntBASIC2.29□□□□□ -2.04
Trim27Q62158 Gm26157-201ENSMUST00000158974 126 ntBASIC2.29□□□□□ -2.04
Trim27Q62158 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
Trim27Q62158 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.29□□□□□ -2.04
Trim27Q62158 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.29□□□□□ -2.04
Trim27Q62158 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.29□□□□□ -2.04
Trim27Q62158 Gm26164-201ENSMUST00000083793 104 ntBASIC2.29□□□□□ -2.04
Trim27Q62158 Gm26314-201ENSMUST00000083891 107 ntBASIC2.29□□□□□ -2.04
Trim27Q62158 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.29□□□□□ -2.04
Trim27Q62158 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Trim27Q62158 Gm25090-201ENSMUST00000104000 132 ntBASIC2.28□□□□□ -2.04
Trim27Q62158 Gm25827-201ENSMUST00000157089 107 ntBASIC2.28□□□□□ -2.04
Trim27Q62158 Gm25909-201ENSMUST00000157619 121 ntBASIC2.28□□□□□ -2.04
Trim27Q62158 Gm24853-201ENSMUST00000158026 121 ntBASIC2.28□□□□□ -2.04
Trim27Q62158 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC2.28□□□□□ -2.04
Trim27Q62158 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
Trim27Q62158 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.28□□□□□ -2.04
Trim27Q62158 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC2.28□□□□□ -2.04
Trim27Q62158 Gm44482-201ENSMUST00000199232 103 ntBASIC2.28□□□□□ -2.04
Trim27Q62158 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC2.28□□□□□ -2.04
Trim27Q62158 AC159619.2-201ENSMUST00000222924 401 ntBASIC2.28□□□□□ -2.04
Trim27Q62158 Gm23041-201ENSMUST00000083868 106 ntBASIC2.28□□□□□ -2.04
Trim27Q62158 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Trim27Q62158 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trim27Q62158 Gm24896-201ENSMUST00000122741 135 ntBASIC2.27□□□□□ -2.05
Trim27Q62158 Gm15281-201ENSMUST00000125181 351 ntBASIC2.27□□□□□ -2.05
Trim27Q62158 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Trim27Q62158 Gm20613-201ENSMUST00000175828 345 ntBASIC2.27□□□□□ -2.05
Trim27Q62158 Gm22264-201ENSMUST00000178200 107 ntBASIC2.27□□□□□ -2.05
Trim27Q62158 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.27□□□□□ -2.05
Trim27Q62158 Mir6950-201ENSMUST00000184438 73 ntBASIC2.27□□□□□ -2.05
Trim27Q62158 Gm7654-201ENSMUST00000186738 683 ntBASIC2.27□□□□□ -2.05
Trim27Q62158 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.27□□□□□ -2.05
Trim27Q62158 Gm43238-201ENSMUST00000196463 359 ntBASIC2.27□□□□□ -2.05
Trim27Q62158 Gm34783-201ENSMUST00000209159 303 ntBASIC2.27□□□□□ -2.05
Trim27Q62158 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.27□□□□□ -2.05
Trim27Q62158 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trim27Q62158 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms