Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.8□□□□□ -1.96
Ift88Q61371 Gm23128-201ENSMUST00000104257 132 ntBASIC2.8□□□□□ -1.96
Ift88Q61371 Gm22023-201ENSMUST00000104354 130 ntBASIC2.8□□□□□ -1.96
Ift88Q61371 Gm24403-201ENSMUST00000104616 130 ntBASIC2.8□□□□□ -1.96
Ift88Q61371 Gm11936-201ENSMUST00000118323 160 ntBASIC2.8□□□□□ -1.96
Ift88Q61371 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.8□□□□□ -1.96
Ift88Q61371 Gm23980-201ENSMUST00000157135 158 ntBASIC2.8□□□□□ -1.96
Ift88Q61371 Gm24911-201ENSMUST00000157292 136 ntBASIC2.8□□□□□ -1.96
Ift88Q61371 Gm25184-201ENSMUST00000157753 163 ntBASIC2.8□□□□□ -1.96
Ift88Q61371 Gm25528-201ENSMUST00000180264 132 ntBASIC2.8□□□□□ -1.96
Ift88Q61371 Gm37037-201ENSMUST00000194475 424 ntBASIC2.8□□□□□ -1.96
Ift88Q61371 Gm23128-202ENSMUST00000196578 133 ntBASIC2.8□□□□□ -1.96
Ift88Q61371 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Ift88Q61371 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.8□□□□□ -1.96
Ift88Q61371 Gm45879-201ENSMUST00000212521 392 ntBASIC2.8□□□□□ -1.96
Ift88Q61371 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Ift88Q61371 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.79□□□□□ -1.96
Ift88Q61371 Gm26249-201ENSMUST00000116708 118 ntBASIC2.79□□□□□ -1.96
Ift88Q61371 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.79□□□□□ -1.96
Ift88Q61371 Gm24138-201ENSMUST00000157572 114 ntBASIC2.79□□□□□ -1.96
Ift88Q61371 Gm7592-201ENSMUST00000160674 627 ntBASIC2.79□□□□□ -1.96
Ift88Q61371 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.79□□□□□ -1.96
Ift88Q61371 Gm43991-201ENSMUST00000203751 274 ntBASIC2.79□□□□□ -1.96
Ift88Q61371 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.79□□□□□ -1.96
Ift88Q61371 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Ift88Q61371 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Ift88Q61371 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
Ift88Q61371 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Ift88Q61371 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Ift88Q61371 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Ift88Q61371 Gm25526-201ENSMUST00000104332 132 ntBASIC2.78□□□□□ -1.96
Ift88Q61371 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.78□□□□□ -1.96
Ift88Q61371 Gm12213-201ENSMUST00000119924 353 ntBASIC2.78□□□□□ -1.96
Ift88Q61371 Gm25718-201ENSMUST00000158632 118 ntBASIC2.78□□□□□ -1.96
Ift88Q61371 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Ift88Q61371 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.78□□□□□ -1.96
Ift88Q61371 Gm29140-201ENSMUST00000190187 476 ntBASIC2.78□□□□□ -1.96
Ift88Q61371 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC2.78□□□□□ -1.96
Ift88Q61371 Gm44024-201ENSMUST00000203008 476 ntBASIC2.78□□□□□ -1.96
Ift88Q61371 Gm30534-201ENSMUST00000217928 207 ntBASIC2.78□□□□□ -1.96
Ift88Q61371 Gm22294-201ENSMUST00000083308 104 ntBASIC2.78□□□□□ -1.96
Ift88Q61371 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Ift88Q61371 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.78□□□□□ -1.96
Ift88Q61371 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
Ift88Q61371 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.77□□□□□ -1.97
Ift88Q61371 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC2.77□□□□□ -1.97
Ift88Q61371 Gm26005-201ENSMUST00000158802 134 ntBASIC2.77□□□□□ -1.97
Ift88Q61371 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Ift88Q61371 Gm43626-201ENSMUST00000198575 162 ntBASIC2.77□□□□□ -1.97
Ift88Q61371 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.77□□□□□ -1.97
Ift88Q61371 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.77□□□□□ -1.97
Ift88Q61371 AC173482.4-201ENSMUST00000225096 348 ntBASIC2.77□□□□□ -1.97
Ift88Q61371 Gm26265-201ENSMUST00000083277 135 ntBASIC2.77□□□□□ -1.97
Ift88Q61371 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Ift88Q61371 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
Ift88Q61371 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.77□□□□□ -1.97
Ift88Q61371 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Ift88Q61371 Gm4746-201ENSMUST00000120395 2406 ntBASIC2.77□□□□□ -1.97
Ift88Q61371 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.76□□□□□ -1.97
Ift88Q61371 Gm14843-201ENSMUST00000119596 212 ntBASIC2.76□□□□□ -1.97
Ift88Q61371 Gm7209-201ENSMUST00000122339 333 ntBASIC2.76□□□□□ -1.97
Ift88Q61371 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.76□□□□□ -1.97
Ift88Q61371 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC2.76□□□□□ -1.97
Ift88Q61371 Gm26099-201ENSMUST00000157248 109 ntBASIC2.76□□□□□ -1.97
Ift88Q61371 Gm22315-201ENSMUST00000158010 143 ntBASIC2.76□□□□□ -1.97
Ift88Q61371 Gm23047-201ENSMUST00000177661 94 ntBASIC2.76□□□□□ -1.97
Ift88Q61371 Gm29167-201ENSMUST00000190024 377 ntBASIC2.76□□□□□ -1.97
Ift88Q61371 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.76□□□□□ -1.97
Ift88Q61371 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.76□□□□□ -1.97
Ift88Q61371 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Ift88Q61371 AC123709.1-201ENSMUST00000224848 345 ntBASIC2.76□□□□□ -1.97
Ift88Q61371 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.76□□□□□ -1.97
Ift88Q61371 AC122834.1-201ENSMUST00000227182 425 ntBASIC2.76□□□□□ -1.97
Ift88Q61371 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.76□□□□□ -1.97
Ift88Q61371 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Ift88Q61371 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Ift88Q61371 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.76□□□□□ -1.97
Ift88Q61371 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Ift88Q61371 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
Ift88Q61371 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Ift88Q61371 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Ift88Q61371 Mir466b-8-201ENSMUST00000103883 86 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Gm25875-201ENSMUST00000104323 107 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Gm22713-201ENSMUST00000116895 130 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Gm15365-201ENSMUST00000122392 300 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Gm26479-201ENSMUST00000122620 106 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Gm12434-201ENSMUST00000141580 653 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Ift88Q61371 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Gm25012-201ENSMUST00000158396 164 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Gm26406-201ENSMUST00000158503 124 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.75□□□□□ -1.97
Ift88Q61371 Gm22800-201ENSMUST00000175627 94 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Gm21827-201ENSMUST00000178247 423 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Gm27220-201ENSMUST00000183453 262 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Mir6353-201ENSMUST00000183596 113 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Gm28647-201ENSMUST00000188416 197 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.75□□□□□ -1.97
Ift88Q61371 Trbv6-201ENSMUST00000193743 276 ntBASIC2.75□□□□□ -1.97
Ift88Q61371 Mir466e-201ENSMUST00000198862 84 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms