Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm44903-201ENSMUST00000206840 130 ntBASIC2.8□□□□□ -1.96
CtcfQ61164 Gm45315-201ENSMUST00000209283 333 ntBASIC2.8□□□□□ -1.96
CtcfQ61164 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.8□□□□□ -1.96
CtcfQ61164 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.8□□□□□ -1.96
CtcfQ61164 Gm23517-201ENSMUST00000082830 192 ntBASIC2.8□□□□□ -1.96
CtcfQ61164 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.8□□□□□ -1.96
CtcfQ61164 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CtcfQ61164 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.79□□□□□ -1.96
CtcfQ61164 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
CtcfQ61164 Mir297a-2-201ENSMUST00000103795 90 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 Mir344c-201ENSMUST00000103919 92 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 Snora36b-201ENSMUST00000104383 132 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 Gm15497-201ENSMUST00000119137 551 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 Gm24629-201ENSMUST00000122762 89 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
CtcfQ61164 Gm23600-201ENSMUST00000157260 71 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 Mir1942-201ENSMUST00000157274 63 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 Gm22382-201ENSMUST00000158185 130 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 Gm8292-201ENSMUST00000162574 396 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 Gm6788-201ENSMUST00000166459 270 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 Gm22911-201ENSMUST00000177920 107 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 Gm26225-201ENSMUST00000082508 135 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 Gm26457-201ENSMUST00000082678 78 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 Gm26066-201ENSMUST00000083385 109 ntBASIC2.79□□□□□ -1.96
CtcfQ61164 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CtcfQ61164 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
CtcfQ61164 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CtcfQ61164 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CtcfQ61164 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
CtcfQ61164 Gm23128-201ENSMUST00000104257 132 ntBASIC2.78□□□□□ -1.96
CtcfQ61164 Gm26247-201ENSMUST00000116702 91 ntBASIC2.78□□□□□ -1.96
CtcfQ61164 Gm13967-201ENSMUST00000120404 380 ntBASIC2.78□□□□□ -1.96
CtcfQ61164 Gm12042-201ENSMUST00000120479 301 ntBASIC2.78□□□□□ -1.96
CtcfQ61164 Gm24908-201ENSMUST00000157294 127 ntBASIC2.78□□□□□ -1.96
CtcfQ61164 Gm24691-201ENSMUST00000157762 140 ntBASIC2.78□□□□□ -1.96
CtcfQ61164 Gm16584-201ENSMUST00000159267 189 ntBASIC2.78□□□□□ -1.96
CtcfQ61164 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.78□□□□□ -1.96
CtcfQ61164 Gm23128-202ENSMUST00000196578 133 ntBASIC2.78□□□□□ -1.96
CtcfQ61164 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.78□□□□□ -1.96
CtcfQ61164 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.78□□□□□ -1.96
CtcfQ61164 Gm23625-201ENSMUST00000082457 100 ntBASIC2.78□□□□□ -1.96
CtcfQ61164 Gm25698-201ENSMUST00000082897 107 ntBASIC2.78□□□□□ -1.96
CtcfQ61164 Gm23041-201ENSMUST00000083868 106 ntBASIC2.78□□□□□ -1.96
CtcfQ61164 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CtcfQ61164 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.78□□□□□ -1.96
CtcfQ61164 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CtcfQ61164 Gm22486-201ENSMUST00000116815 137 ntBASIC2.77□□□□□ -1.97
CtcfQ61164 Gm24907-201ENSMUST00000116932 128 ntBASIC2.77□□□□□ -1.97
CtcfQ61164 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.77□□□□□ -1.97
CtcfQ61164 Gm25333-201ENSMUST00000158035 246 ntBASIC2.77□□□□□ -1.97
CtcfQ61164 Gm24487-201ENSMUST00000178017 63 ntBASIC2.77□□□□□ -1.97
CtcfQ61164 Mir7667-201ENSMUST00000183866 63 ntBASIC2.77□□□□□ -1.97
CtcfQ61164 Gm28825-201ENSMUST00000186233 238 ntBASIC2.77□□□□□ -1.97
CtcfQ61164 Gm29262-201ENSMUST00000190084 196 ntBASIC2.77□□□□□ -1.97
CtcfQ61164 Gm29140-201ENSMUST00000190187 476 ntBASIC2.77□□□□□ -1.97
CtcfQ61164 Gm38060-201ENSMUST00000194822 464 ntBASIC2.77□□□□□ -1.97
CtcfQ61164 Gm44473-201ENSMUST00000204039 152 ntBASIC2.77□□□□□ -1.97
CtcfQ61164 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.77□□□□□ -1.97
CtcfQ61164 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.77□□□□□ -1.97
CtcfQ61164 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.77□□□□□ -1.97
CtcfQ61164 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CtcfQ61164 Gm26497-201ENSMUST00000083146 107 ntBASIC2.77□□□□□ -1.97
CtcfQ61164 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
CtcfQ61164 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.77□□□□□ -1.97
CtcfQ61164 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CtcfQ61164 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CtcfQ61164 AC102369.2-201ENSMUST00000219725 1679 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm24640-201ENSMUST00000116949 126 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm22626-201ENSMUST00000116990 126 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm23988-201ENSMUST00000117034 122 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm12771-201ENSMUST00000120246 135 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm12686-201ENSMUST00000120546 397 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm27723-201ENSMUST00000157398 63 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm24818-201ENSMUST00000175093 161 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm24813-201ENSMUST00000175310 84 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Mup-ps11-201ENSMUST00000178040 545 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Mup-ps3-201ENSMUST00000178315 545 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm24761-201ENSMUST00000179589 127 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm24488-201ENSMUST00000179934 127 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm25701-201ENSMUST00000179988 127 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm26431-201ENSMUST00000180199 127 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.76□□□□□ -1.97
CtcfQ61164 Gm36946-201ENSMUST00000192706 435 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Mir7661-201ENSMUST00000197023 61 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm44478-201ENSMUST00000204875 114 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm44960-201ENSMUST00000207403 141 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm22443-201ENSMUST00000082890 107 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm23454-201ENSMUST00000083332 133 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CtcfQ61164 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CtcfQ61164 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
CtcfQ61164 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CtcfQ61164 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.76□□□□□ -1.97
CtcfQ61164 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms