Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Gm23530-201ENSMUST00000104564 137 ntBASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Gm13443-201ENSMUST00000120770 555 ntBASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Gm23791-201ENSMUST00000122553 293 ntBASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Gm24480-201ENSMUST00000157442 103 ntBASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Gm25012-201ENSMUST00000158396 164 ntBASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Mir669k-201ENSMUST00000177742 127 ntBASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Gm25673-201ENSMUST00000179957 127 ntBASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Gm27374-201ENSMUST00000183660 81 ntBASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Gm37918-201ENSMUST00000192071 120 ntBASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 AC159188.1-201ENSMUST00000225198 526 ntBASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Scaf1Q5U4C3 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Gm26135-201ENSMUST00000101993 72 ntBASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Gm14748-201ENSMUST00000119819 411 ntBASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Gm22281-201ENSMUST00000157198 103 ntBASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Gm24440-201ENSMUST00000157236 63 ntBASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Gm24512-201ENSMUST00000174963 65 ntBASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Snord50b-201ENSMUST00000178497 72 ntBASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Gm43993-201ENSMUST00000203972 247 ntBASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Gm9712-201ENSMUST00000210842 311 ntBASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 AC154552.7-201ENSMUST00000222824 156 ntBASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Gm24950-201ENSMUST00000082768 191 ntBASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Gm23971-201ENSMUST00000083317 191 ntBASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Gm23849-201ENSMUST00000083833 191 ntBASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Gm26316-201ENSMUST00000083886 191 ntBASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Rnu2-10-201ENSMUST00000084010 191 ntBASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
Scaf1Q5U4C3 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC4.67□□□□□ -1.66
Scaf1Q5U4C3 Mir673-201ENSMUST00000102361 91 ntBASIC4.67□□□□□ -1.66
Scaf1Q5U4C3 Gm24283-201ENSMUST00000104233 107 ntBASIC4.67□□□□□ -1.66
Scaf1Q5U4C3 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Scaf1Q5U4C3 Gm25066-201ENSMUST00000158145 123 ntBASIC4.67□□□□□ -1.66
Scaf1Q5U4C3 Gm25223-201ENSMUST00000158200 110 ntBASIC4.67□□□□□ -1.66
Scaf1Q5U4C3 Gm17113-201ENSMUST00000170118 171 ntBASIC4.67□□□□□ -1.66
Scaf1Q5U4C3 Gm25020-201ENSMUST00000178071 107 ntBASIC4.67□□□□□ -1.66
Scaf1Q5U4C3 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Scaf1Q5U4C3 Gm45288-201ENSMUST00000210236 151 ntBASIC4.67□□□□□ -1.66
Scaf1Q5U4C3 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC4.67□□□□□ -1.66
Scaf1Q5U4C3 Gm23040-201ENSMUST00000083869 163 ntBASIC4.67□□□□□ -1.66
Scaf1Q5U4C3 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
Scaf1Q5U4C3 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Scaf1Q5U4C3 Gm24126-201ENSMUST00000104111 106 ntBASIC4.66□□□□□ -1.66
Scaf1Q5U4C3 Gm14973-201ENSMUST00000117248 255 ntBASIC4.66□□□□□ -1.66
Scaf1Q5U4C3 Gm15377-201ENSMUST00000119594 246 ntBASIC4.66□□□□□ -1.66
Scaf1Q5U4C3 Gm13345-201ENSMUST00000121928 228 ntBASIC4.66□□□□□ -1.66
Scaf1Q5U4C3 Gm23592-201ENSMUST00000157859 117 ntBASIC4.66□□□□□ -1.66
Scaf1Q5U4C3 Gm23209-201ENSMUST00000158667 110 ntBASIC4.66□□□□□ -1.66
Scaf1Q5U4C3 Mir1936-201ENSMUST00000158699 93 ntBASIC4.66□□□□□ -1.66
Scaf1Q5U4C3 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Scaf1Q5U4C3 AC122418.1-201ENSMUST00000225012 511 ntBASIC4.66□□□□□ -1.66
Scaf1Q5U4C3 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Scaf1Q5U4C3 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Scaf1Q5U4C3 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Scaf1Q5U4C3 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Scaf1Q5U4C3 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
Scaf1Q5U4C3 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Scaf1Q5U4C3 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Scaf1Q5U4C3 Gm37566-201ENSMUST00000192363 4355 ntBASIC4.65□□□□□ -1.66
Scaf1Q5U4C3 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Scaf1Q5U4C3 Gm14811-201ENSMUST00000117070 117 ntBASIC4.65□□□□□ -1.67
Scaf1Q5U4C3 Gm23716-201ENSMUST00000157348 144 ntBASIC4.65□□□□□ -1.67
Scaf1Q5U4C3 Gm26412-201ENSMUST00000157666 55 ntBASIC4.65□□□□□ -1.67
Scaf1Q5U4C3 Gm29553-201ENSMUST00000189692 279 ntBASIC4.65□□□□□ -1.67
Scaf1Q5U4C3 Gm5829-201ENSMUST00000191383 351 ntBASIC4.65□□□□□ -1.67
Scaf1Q5U4C3 AC027184.1-201ENSMUST00000226991 424 ntBASIC4.65□□□□□ -1.67
Scaf1Q5U4C3 Gm25634-201ENSMUST00000082667 105 ntBASIC4.65□□□□□ -1.67
Scaf1Q5U4C3 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Scaf1Q5U4C3 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Scaf1Q5U4C3 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Scaf1Q5U4C3 Gm25538-201ENSMUST00000101943 107 ntBASIC4.64□□□□□ -1.67
Scaf1Q5U4C3 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC4.64□□□□□ -1.67
Scaf1Q5U4C3 Gm22034-201ENSMUST00000157283 134 ntBASIC4.64□□□□□ -1.67
Scaf1Q5U4C3 Mir721-201ENSMUST00000200230 88 ntBASIC4.64□□□□□ -1.67
Scaf1Q5U4C3 Gm43932-201ENSMUST00000204499 52 ntBASIC4.64□□□□□ -1.67
Scaf1Q5U4C3 Gm45013-201ENSMUST00000206883 178 ntBASIC4.64□□□□□ -1.67
Scaf1Q5U4C3 Gm44564-201ENSMUST00000207985 180 ntBASIC4.64□□□□□ -1.67
Scaf1Q5U4C3 Gm4945-201ENSMUST00000075152 453 ntBASIC4.64□□□□□ -1.67
Scaf1Q5U4C3 Gm22421-201ENSMUST00000083058 107 ntBASIC4.64□□□□□ -1.67
Scaf1Q5U4C3 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.64□□□□□ -1.67
Scaf1Q5U4C3 AC154386.1-201ENSMUST00000222753 2871 ntBASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 AC161254.1-201ENSMUST00000220310 3842 ntBASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 Gm22678-201ENSMUST00000116974 101 ntBASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Scaf1Q5U4C3 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 162.1 ms