Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm2830-201ENSMUST00000140330 385 ntBASIC2.42□□□□□ -2.02
Vps54Q5SPW0 Gm16038-201ENSMUST00000159317 193 ntBASIC2.42□□□□□ -2.02
Vps54Q5SPW0 Gm26400-201ENSMUST00000175012 85 ntBASIC2.42□□□□□ -2.02
Vps54Q5SPW0 Mir6399-201ENSMUST00000184050 84 ntBASIC2.42□□□□□ -2.02
Vps54Q5SPW0 Mir7016-201ENSMUST00000184308 72 ntBASIC2.42□□□□□ -2.02
Vps54Q5SPW0 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.42□□□□□ -2.02
Vps54Q5SPW0 Gm45445-201ENSMUST00000209586 232 ntBASIC2.42□□□□□ -2.02
Vps54Q5SPW0 Gm19572-201ENSMUST00000214326 338 ntBASIC2.42□□□□□ -2.02
Vps54Q5SPW0 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.42□□□□□ -2.02
Vps54Q5SPW0 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.42□□□□□ -2.02
Vps54Q5SPW0 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.42□□□□□ -2.02
Vps54Q5SPW0 Snord68-201ENSMUST00000082516 86 ntBASIC2.42□□□□□ -2.02
Vps54Q5SPW0 Gm23462-201ENSMUST00000083264 104 ntBASIC2.42□□□□□ -2.02
Vps54Q5SPW0 Gm23041-201ENSMUST00000083868 106 ntBASIC2.42□□□□□ -2.02
Vps54Q5SPW0 Mir496a-201ENSMUST00000093627 79 ntBASIC2.42□□□□□ -2.02
Vps54Q5SPW0 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
Vps54Q5SPW0 Gm42755-201ENSMUST00000198533 1493 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm15010-201ENSMUST00000117153 407 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm13518-201ENSMUST00000120018 233 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm26255-201ENSMUST00000122492 103 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm23120-201ENSMUST00000157654 287 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm25460-201ENSMUST00000157954 127 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm24726-201ENSMUST00000158232 121 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm7592-201ENSMUST00000160674 627 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm17919-201ENSMUST00000173344 312 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm27959-201ENSMUST00000185172 111 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm37313-201ENSMUST00000191673 290 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm37162-201ENSMUST00000191708 551 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm7240-201ENSMUST00000220769 664 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.41□□□□□ -2.02
Vps54Q5SPW0 CT025602.1-201ENSMUST00000227281 382 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm25937-201ENSMUST00000083912 107 ntBASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Vps54Q5SPW0 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.4□□□□□ -2.02
Vps54Q5SPW0 Gm25781-201ENSMUST00000122527 84 ntBASIC2.4□□□□□ -2.03
Vps54Q5SPW0 Gm24478-201ENSMUST00000157439 158 ntBASIC2.4□□□□□ -2.03
Vps54Q5SPW0 Gm23381-201ENSMUST00000157676 94 ntBASIC2.4□□□□□ -2.03
Vps54Q5SPW0 Gm22316-201ENSMUST00000158012 216 ntBASIC2.4□□□□□ -2.03
Vps54Q5SPW0 Gm22800-201ENSMUST00000175627 94 ntBASIC2.4□□□□□ -2.03
Vps54Q5SPW0 Gm24487-201ENSMUST00000178017 63 ntBASIC2.4□□□□□ -2.03
Vps54Q5SPW0 Mir6951-201ENSMUST00000183910 75 ntBASIC2.4□□□□□ -2.03
Vps54Q5SPW0 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.4□□□□□ -2.03
Vps54Q5SPW0 Trbv6-201ENSMUST00000193743 276 ntBASIC2.4□□□□□ -2.03
Vps54Q5SPW0 Gm43914-201ENSMUST00000203592 594 ntBASIC2.4□□□□□ -2.03
Vps54Q5SPW0 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.4□□□□□ -2.03
Vps54Q5SPW0 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.4□□□□□ -2.03
Vps54Q5SPW0 AC116589.4-201ENSMUST00000222390 216 ntBASIC2.4□□□□□ -2.03
Vps54Q5SPW0 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.4□□□□□ -2.03
Vps54Q5SPW0 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.4□□□□□ -2.03
Vps54Q5SPW0 Gm25079-201ENSMUST00000082529 203 ntBASIC2.4□□□□□ -2.03
Vps54Q5SPW0 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Vps54Q5SPW0 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
Vps54Q5SPW0 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.03
Vps54Q5SPW0 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.4□□□□□ -2.03
Vps54Q5SPW0 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Vps54Q5SPW0 Gm24280-201ENSMUST00000104237 134 ntBASIC2.39□□□□□ -2.03
Vps54Q5SPW0 Gm6444-201ENSMUST00000119611 458 ntBASIC2.39□□□□□ -2.03
Vps54Q5SPW0 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.39□□□□□ -2.03
Vps54Q5SPW0 Gm15365-201ENSMUST00000122392 300 ntBASIC2.39□□□□□ -2.03
Vps54Q5SPW0 Gm22843-201ENSMUST00000157710 134 ntBASIC2.39□□□□□ -2.03
Vps54Q5SPW0 Trbv18-201ENSMUST00000194256 294 ntBASIC2.39□□□□□ -2.03
Vps54Q5SPW0 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.39□□□□□ -2.03
Vps54Q5SPW0 Gm45673-201ENSMUST00000210293 358 ntBASIC2.39□□□□□ -2.03
Vps54Q5SPW0 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Vps54Q5SPW0 Gm22062-201ENSMUST00000082563 107 ntBASIC2.39□□□□□ -2.03
Vps54Q5SPW0 Gm22978-201ENSMUST00000082607 160 ntBASIC2.39□□□□□ -2.03
Vps54Q5SPW0 Gm23249-201ENSMUST00000083369 161 ntBASIC2.39□□□□□ -2.03
Vps54Q5SPW0 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.39□□□□□ -2.03
Vps54Q5SPW0 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.39□□□□□ -2.03
Vps54Q5SPW0 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Vps54Q5SPW0 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.38□□□□□ -2.03
Vps54Q5SPW0 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Vps54Q5SPW0 Gm22151-201ENSMUST00000116963 58 ntBASIC2.38□□□□□ -2.03
Vps54Q5SPW0 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.38□□□□□ -2.03
Vps54Q5SPW0 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.38□□□□□ -2.03
Vps54Q5SPW0 Gm27979-201ENSMUST00000185126 56 ntBASIC2.38□□□□□ -2.03
Vps54Q5SPW0 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.38□□□□□ -2.03
Vps54Q5SPW0 Gm25820-202ENSMUST00000197479 128 ntBASIC2.38□□□□□ -2.03
Vps54Q5SPW0 Gm44182-201ENSMUST00000204052 115 ntBASIC2.38□□□□□ -2.03
Vps54Q5SPW0 Gm44555-201ENSMUST00000209008 148 ntBASIC2.38□□□□□ -2.03
Vps54Q5SPW0 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.38□□□□□ -2.03
Vps54Q5SPW0 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Vps54Q5SPW0 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.38□□□□□ -2.03
Vps54Q5SPW0 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.38□□□□□ -2.03
Vps54Q5SPW0 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Vps54Q5SPW0 Gm23246-201ENSMUST00000083371 67 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms