Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.07□□□□□ -2.4
Trav3-1Q5R1I8 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC0.07□□□□□ -2.4
Trav3-1Q5R1I8 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.07□□□□□ -2.4
Trav3-1Q5R1I8 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC0.07□□□□□ -2.4
Trav3-1Q5R1I8 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.07□□□□□ -2.4
Trav3-1Q5R1I8 Gm22306-201ENSMUST00000082692 107 ntBASIC0.07□□□□□ -2.4
Trav3-1Q5R1I8 Gm25698-201ENSMUST00000082897 107 ntBASIC0.07□□□□□ -2.4
Trav3-1Q5R1I8 Gm24610-201ENSMUST00000083270 109 ntBASIC0.07□□□□□ -2.4
Trav3-1Q5R1I8 Gm14797-201ENSMUST00000119378 1480 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm24833-201ENSMUST00000116775 120 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm14887-201ENSMUST00000119522 663 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm12837-201ENSMUST00000120131 373 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm14269-201ENSMUST00000120455 306 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm12881-201ENSMUST00000121191 203 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm11849-201ENSMUST00000121293 261 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm24836-201ENSMUST00000122609 108 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm23331-201ENSMUST00000157423 108 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm23120-201ENSMUST00000157654 287 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm4076-201ENSMUST00000179230 965 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm28921-201ENSMUST00000190219 378 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Trbv24-201ENSMUST00000194614 347 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm42958-201ENSMUST00000197595 318 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm44828-201ENSMUST00000203745 106 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm44446-201ENSMUST00000204864 255 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 AC173482.4-201ENSMUST00000225096 348 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 CT010506.2-201ENSMUST00000225618 183 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm25403-201ENSMUST00000082971 143 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Snord7-201ENSMUST00000083781 97 ntBASIC0.06□□□□□ -2.4
Trav3-1Q5R1I8 Gm20541-201ENSMUST00000173035 1406 ntBASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 Gm25506-201ENSMUST00000104339 70 ntBASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 Gm22193-201ENSMUST00000116868 76 ntBASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 Gm8858-201ENSMUST00000118259 342 ntBASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 Gm22038-201ENSMUST00000157277 242 ntBASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 Gm23329-201ENSMUST00000157415 108 ntBASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 Gm25194-201ENSMUST00000177987 79 ntBASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 Gm22263-201ENSMUST00000180060 104 ntBASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 1700112D23Rik-202ENSMUST00000193387 299 ntTSL 2 BASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 Gm19855-201ENSMUST00000210145 249 ntBASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 AC123656.2-201ENSMUST00000226726 227 ntBASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 AC151902.1-201ENSMUST00000227800 375 ntBASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 AC168062.2-201ENSMUST00000228907 422 ntBASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 Gm24920-201ENSMUST00000083018 85 ntBASIC0.05□□□□□ -2.4
Trav3-1Q5R1I8 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Gm13457-201ENSMUST00000117885 267 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Gm14943-201ENSMUST00000118056 546 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 n-R5s63-201ENSMUST00000122756 103 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Gm16359-201ENSMUST00000124511 289 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Gm23587-201ENSMUST00000157658 84 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Gm25715-201ENSMUST00000158627 125 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Gm15914-201ENSMUST00000161922 309 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Gm24154-201ENSMUST00000175261 130 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Gm24713-201ENSMUST00000178850 107 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Gm25448-201ENSMUST00000180065 107 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Gm37727-201ENSMUST00000191637 819 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Ighv1-46-201ENSMUST00000193988 351 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Gm43004-201ENSMUST00000201872 703 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Gm44609-201ENSMUST00000207157 460 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 CT009696.1-201ENSMUST00000215745 256 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.04□□□□□ -2.4
Trav3-1Q5R1I8 Gm24068-201ENSMUST00000104513 132 ntBASIC0.03□□□□□ -2.4
Trav3-1Q5R1I8 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC0.03□□□□□ -2.4
Trav3-1Q5R1I8 Gm23605-201ENSMUST00000157255 127 ntBASIC0.03□□□□□ -2.4
Trav3-1Q5R1I8 Gm18396-201ENSMUST00000177095 361 ntBASIC0.03□□□□□ -2.4
Trav3-1Q5R1I8 Gm44754-201ENSMUST00000208155 400 ntBASIC0.03□□□□□ -2.4
Trav3-1Q5R1I8 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.03□□□□□ -2.4
Trav3-1Q5R1I8 AC170810.3-201ENSMUST00000226177 374 ntBASIC0.03□□□□□ -2.4
Trav3-1Q5R1I8 AC166344.2-201ENSMUST00000226747 374 ntBASIC0.03□□□□□ -2.4
Trav3-1Q5R1I8 Gm26446-201ENSMUST00000082455 103 ntBASIC0.03□□□□□ -2.4
Trav3-1Q5R1I8 Gm37630-201ENSMUST00000194210 1456 ntBASIC0.03□□□□□ -2.41
Trav3-1Q5R1I8 Mir687-201ENSMUST00000102166 89 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm11859-201ENSMUST00000118099 455 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm22277-201ENSMUST00000157204 277 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm23641-201ENSMUST00000157857 101 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm25491-201ENSMUST00000158733 308 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Vmn2r-ps17-201ENSMUST00000178733 375 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm25156-201ENSMUST00000179809 79 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm23648-201ENSMUST00000180301 107 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Mir6926-201ENSMUST00000184562 68 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm37923-201ENSMUST00000191624 161 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm43529-201ENSMUST00000199178 412 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 Gm45375-201ENSMUST00000210338 280 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 AC159621.1-201ENSMUST00000223249 163 ntBASIC0.02□□□□□ -2.41
Trav3-1Q5R1I8 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms