Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm38290-201ENSMUST00000195238 315 ntBASIC0.68□□□□□ -2.3
Trav5d-4Q5R1F6 Gm44910-201ENSMUST00000208451 396 ntBASIC0.68□□□□□ -2.3
Trav5d-4Q5R1F6 Gm8125-201ENSMUST00000216602 738 ntBASIC0.68□□□□□ -2.3
Trav5d-4Q5R1F6 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
Trav5d-4Q5R1F6 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.68□□□□□ -2.3
Trav5d-4Q5R1F6 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.68□□□□□ -2.3
Trav5d-4Q5R1F6 Gm24624-201ENSMUST00000082617 164 ntBASIC0.68□□□□□ -2.3
Trav5d-4Q5R1F6 Gm23015-201ENSMUST00000104145 128 ntBASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 Gm12106-201ENSMUST00000116006 1200 ntBASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 Gm17054-201ENSMUST00000169811 259 ntBASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 Gm25956-201ENSMUST00000175115 217 ntBASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 Gm20630-201ENSMUST00000177387 551 ntBASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 Gm22584-201ENSMUST00000177935 92 ntBASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 Gm22633-201ENSMUST00000179834 107 ntBASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 Mir7052-201ENSMUST00000184821 65 ntBASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 Gm9251-201ENSMUST00000197202 628 ntBASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 AC162931.1-201ENSMUST00000214184 267 ntBASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.67□□□□□ -2.3
Trav5d-4Q5R1F6 Gm23766-201ENSMUST00000103894 80 ntBASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Gm14355-201ENSMUST00000117352 264 ntBASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Gm14362-201ENSMUST00000121679 273 ntBASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Gm14364-201ENSMUST00000129209 267 ntBASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Gm15254-201ENSMUST00000149567 273 ntBASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Gm22929-201ENSMUST00000175517 107 ntBASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Gm24390-201ENSMUST00000179578 62 ntBASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Gm26652-202ENSMUST00000181672 475 ntBASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Gm44429-201ENSMUST00000203542 186 ntBASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Gm35736-201ENSMUST00000203681 313 ntBASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Gm22577-201ENSMUST00000083731 109 ntBASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Trav5d-4Q5R1F6 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Gm25506-201ENSMUST00000104339 70 ntBASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Gm12432-201ENSMUST00000119540 186 ntBASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Gm14989-201ENSMUST00000120497 207 ntBASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Gm14765-201ENSMUST00000121954 326 ntBASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Gm7925-201ENSMUST00000166690 401 ntBASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Gm23419-201ENSMUST00000175523 84 ntBASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Gm22263-201ENSMUST00000180060 104 ntBASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Gm27421-201ENSMUST00000184729 167 ntBASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Gm42533-201ENSMUST00000196247 157 ntBASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Gm44254-201ENSMUST00000204184 322 ntBASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Gm24045-201ENSMUST00000083113 98 ntBASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.31
Trav5d-4Q5R1F6 Gm25269-201ENSMUST00000122601 104 ntBASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 Gm17052-201ENSMUST00000165496 289 ntBASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 Gm21815-201ENSMUST00000178213 664 ntBASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 Gm29005-201ENSMUST00000186773 320 ntBASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 Trav5d-2-201ENSMUST00000196107 275 ntBASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 Gm44491-201ENSMUST00000196794 96 ntBASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 Trav5n-2-201ENSMUST00000197136 275 ntBASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 Gm18696-201ENSMUST00000220103 274 ntBASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 AC156560.1-201ENSMUST00000221425 256 ntBASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 Gm24615-201ENSMUST00000083268 113 ntBASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 Gm23453-201ENSMUST00000083326 106 ntBASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 AC158598.2-201ENSMUST00000213397 3832 ntBASIC0.64□□□□□ -2.31
Trav5d-4Q5R1F6 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
Trav5d-4Q5R1F6 Gm22193-201ENSMUST00000116868 76 ntBASIC0.63□□□□□ -2.31
Trav5d-4Q5R1F6 Gm11389-201ENSMUST00000121407 430 ntBASIC0.63□□□□□ -2.31
Trav5d-4Q5R1F6 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.63□□□□□ -2.31
Trav5d-4Q5R1F6 Gm25663-201ENSMUST00000157698 135 ntBASIC0.63□□□□□ -2.31
Trav5d-4Q5R1F6 Gm27656-201ENSMUST00000185055 80 ntBASIC0.63□□□□□ -2.31
Trav5d-4Q5R1F6 Gm29661-201ENSMUST00000186781 315 ntBASIC0.63□□□□□ -2.31
Trav5d-4Q5R1F6 Gm29308-201ENSMUST00000188863 315 ntBASIC0.63□□□□□ -2.31
Trav5d-4Q5R1F6 Gm42805-201ENSMUST00000196158 276 ntBASIC0.63□□□□□ -2.31
Trav5d-4Q5R1F6 Gm7495-201ENSMUST00000215099 426 ntBASIC0.63□□□□□ -2.31
Trav5d-4Q5R1F6 Gm20102-201ENSMUST00000222445 220 ntBASIC0.63□□□□□ -2.31
Trav5d-4Q5R1F6 AC153646.1-201ENSMUST00000223229 1279 ntBASIC0.63□□□□□ -2.31
Trav5d-4Q5R1F6 Gm23735-201ENSMUST00000082551 134 ntBASIC0.63□□□□□ -2.31
Trav5d-4Q5R1F6 Gm22508-201ENSMUST00000082772 110 ntBASIC0.63□□□□□ -2.31
Trav5d-4Q5R1F6 Gm7916-201ENSMUST00000120325 456 ntBASIC0.62□□□□□ -2.31
Trav5d-4Q5R1F6 Gm25544-201ENSMUST00000122676 120 ntBASIC0.62□□□□□ -2.31
Trav5d-4Q5R1F6 Gm22817-201ENSMUST00000157448 356 ntBASIC0.62□□□□□ -2.31
Trav5d-4Q5R1F6 Gm25451-201ENSMUST00000177832 121 ntBASIC0.62□□□□□ -2.31
Trav5d-4Q5R1F6 Gm38113-201ENSMUST00000193704 201 ntBASIC0.62□□□□□ -2.31
Trav5d-4Q5R1F6 Gm37801-201ENSMUST00000194754 274 ntBASIC0.62□□□□□ -2.31
Trav5d-4Q5R1F6 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.62□□□□□ -2.31
Trav5d-4Q5R1F6 Gm42570-201ENSMUST00000195937 292 ntBASIC0.62□□□□□ -2.31
Trav5d-4Q5R1F6 Gm43114-201ENSMUST00000198298 343 ntBASIC0.62□□□□□ -2.31
Trav5d-4Q5R1F6 Gm23503-201ENSMUST00000083903 107 ntBASIC0.62□□□□□ -2.31
Trav5d-4Q5R1F6 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.62□□□□□ -2.31
Trav5d-4Q5R1F6 Gm24579-201ENSMUST00000103964 144 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms