Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Gm25836-201ENSMUST00000158918 123 ntBASIC1.54□□□□□ -2.16
Clhc1Q5M6W3 Gm24174-201ENSMUST00000158933 111 ntBASIC1.54□□□□□ -2.16
Clhc1Q5M6W3 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Clhc1Q5M6W3 Gm43512-201ENSMUST00000198495 176 ntBASIC1.54□□□□□ -2.16
Clhc1Q5M6W3 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.54□□□□□ -2.16
Clhc1Q5M6W3 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.54□□□□□ -2.16
Clhc1Q5M6W3 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.54□□□□□ -2.16
Clhc1Q5M6W3 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 Gm6956-201ENSMUST00000134724 546 ntBASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 Gm25054-201ENSMUST00000157370 97 ntBASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 Gm26501-201ENSMUST00000178307 107 ntBASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 Gm25121-201ENSMUST00000179846 79 ntBASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 Gm24406-201ENSMUST00000083026 128 ntBASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 Gm24536-201ENSMUST00000083144 107 ntBASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 Gm26066-201ENSMUST00000083385 109 ntBASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Clhc1Q5M6W3 Gm13588-201ENSMUST00000120026 135 ntBASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 Gm11606-201ENSMUST00000120706 617 ntBASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 Gm13153-201ENSMUST00000120969 637 ntBASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 Gm14766-201ENSMUST00000121689 367 ntBASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 Gm23411-201ENSMUST00000157988 62 ntBASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 Gm9830-201ENSMUST00000178509 357 ntBASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 Trbv22-201ENSMUST00000191697 291 ntBASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 Gm45315-201ENSMUST00000209283 333 ntBASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 Gm7495-201ENSMUST00000215099 426 ntBASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 Gm24623-201ENSMUST00000082616 194 ntBASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 Gm26922-201ENSMUST00000082687 72 ntBASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 Gm22723-201ENSMUST00000083820 129 ntBASIC1.52□□□□□ -2.17
Clhc1Q5M6W3 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Mir653-201ENSMUST00000102402 85 ntBASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Gm22193-201ENSMUST00000116868 76 ntBASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Gm23854-201ENSMUST00000158378 108 ntBASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Gm24177-201ENSMUST00000158927 131 ntBASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Mir3057-201ENSMUST00000175040 91 ntBASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Gm22308-201ENSMUST00000177609 107 ntBASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Mir7017-201ENSMUST00000184894 62 ntBASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Gm34073-201ENSMUST00000195736 212 ntBASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Snord118-201ENSMUST00000082965 135 ntBASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Mir340-201ENSMUST00000083483 98 ntBASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.51□□□□□ -2.17
Clhc1Q5M6W3 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Clhc1Q5M6W3 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Clhc1Q5M6W3 Gm23015-201ENSMUST00000104145 128 ntBASIC1.5□□□□□ -2.17
Clhc1Q5M6W3 Gm25507-201ENSMUST00000116981 144 ntBASIC1.5□□□□□ -2.17
Clhc1Q5M6W3 Gm24191-201ENSMUST00000157977 122 ntBASIC1.5□□□□□ -2.17
Clhc1Q5M6W3 Gm27957-201ENSMUST00000184054 127 ntBASIC1.5□□□□□ -2.17
Clhc1Q5M6W3 Gm28383-201ENSMUST00000187563 139 ntBASIC1.5□□□□□ -2.17
Clhc1Q5M6W3 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Clhc1Q5M6W3 Gm29262-201ENSMUST00000190084 196 ntBASIC1.5□□□□□ -2.17
Clhc1Q5M6W3 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.5□□□□□ -2.17
Clhc1Q5M6W3 Gm45654-201ENSMUST00000210980 123 ntBASIC1.5□□□□□ -2.17
Clhc1Q5M6W3 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.5□□□□□ -2.17
Clhc1Q5M6W3 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.5□□□□□ -2.17
Clhc1Q5M6W3 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.5□□□□□ -2.17
Clhc1Q5M6W3 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.5□□□□□ -2.17
Clhc1Q5M6W3 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Gm13439-201ENSMUST00000117541 409 ntBASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Gm12417-201ENSMUST00000119153 403 ntBASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Gm24409-201ENSMUST00000157881 152 ntBASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Gm11392-201ENSMUST00000181419 710 ntBASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Mir7026-201ENSMUST00000184384 67 ntBASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Mir6419-201ENSMUST00000184784 113 ntBASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Gm29397-201ENSMUST00000185205 333 ntBASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Gm9156-201ENSMUST00000189660 463 ntBASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Gm44654-201ENSMUST00000208052 329 ntBASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Gm18696-201ENSMUST00000220103 274 ntBASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 AC123709.1-201ENSMUST00000224848 345 ntBASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Gm24615-201ENSMUST00000083268 113 ntBASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
Clhc1Q5M6W3 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.48□□□□□ -2.17
Clhc1Q5M6W3 Mir701-201ENSMUST00000102208 109 ntBASIC1.48□□□□□ -2.17
Clhc1Q5M6W3 Gm22073-201ENSMUST00000122668 189 ntBASIC1.48□□□□□ -2.17
Clhc1Q5M6W3 Gm24895-201ENSMUST00000122742 74 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms