Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Mir6399-201ENSMUST00000184050 84 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Usp28Q5I043 Gm28211-201ENSMUST00000190920 315 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Usp28Q5I043 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Usp28Q5I043 Gm23246-201ENSMUST00000083371 67 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Mir320-201ENSMUST00000083594 82 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Mir301-201ENSMUST00000083655 86 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Gm26164-201ENSMUST00000083793 104 ntBASIC1.72□□□□□ -2.13
Usp28Q5I043 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Usp28Q5I043 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Usp28Q5I043 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Usp28Q5I043 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Usp28Q5I043 Gm15215-201ENSMUST00000117773 489 ntBASIC1.71□□□□□ -2.14
Usp28Q5I043 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.71□□□□□ -2.14
Usp28Q5I043 Gm27926-201ENSMUST00000157180 66 ntBASIC1.71□□□□□ -2.14
Usp28Q5I043 Snord11-201ENSMUST00000158468 84 ntBASIC1.71□□□□□ -2.14
Usp28Q5I043 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Usp28Q5I043 Gm22308-201ENSMUST00000177609 107 ntBASIC1.71□□□□□ -2.14
Usp28Q5I043 Mir6376-201ENSMUST00000185149 131 ntBASIC1.71□□□□□ -2.14
Usp28Q5I043 Gm27959-201ENSMUST00000185172 111 ntBASIC1.71□□□□□ -2.14
Usp28Q5I043 Gm18356-201ENSMUST00000185677 623 ntBASIC1.71□□□□□ -2.14
Usp28Q5I043 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC1.71□□□□□ -2.14
Usp28Q5I043 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.71□□□□□ -2.14
Usp28Q5I043 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.71□□□□□ -2.14
Usp28Q5I043 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.71□□□□□ -2.14
Usp28Q5I043 Gm22997-201ENSMUST00000082845 107 ntBASIC1.71□□□□□ -2.14
Usp28Q5I043 Gm26265-201ENSMUST00000083277 135 ntBASIC1.71□□□□□ -2.14
Usp28Q5I043 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
Usp28Q5I043 Gm38388-201ENSMUST00000195569 1430 ntBASIC1.71□□□□□ -2.14
Usp28Q5I043 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Usp28Q5I043 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
Usp28Q5I043 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.7□□□□□ -2.14
Usp28Q5I043 Mir669d-201ENSMUST00000104644 121 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 Gm14215-201ENSMUST00000120578 221 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Usp28Q5I043 Gm22791-201ENSMUST00000157232 145 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 Gm23558-201ENSMUST00000157823 80 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 Gm22803-201ENSMUST00000158049 283 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 Gm16584-201ENSMUST00000159267 189 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 Gm22800-201ENSMUST00000175627 94 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 Gm27511-201ENSMUST00000183502 127 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Usp28Q5I043 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC1.7□□□□□ -2.14
Usp28Q5I043 Gm44149-201ENSMUST00000204256 226 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 Gm7495-201ENSMUST00000215099 426 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 Gm30155-201ENSMUST00000223458 339 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 Gm26056-201ENSMUST00000083043 104 ntBASIC1.7□□□□□ -2.14
Usp28Q5I043 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Usp28Q5I043 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm22073-201ENSMUST00000122668 189 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm24895-201ENSMUST00000122742 74 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm25888-201ENSMUST00000157778 302 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm24499-201ENSMUST00000158446 104 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm24053-201ENSMUST00000158620 105 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm24573-201ENSMUST00000175499 112 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm21737-201ENSMUST00000178112 664 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm23660-201ENSMUST00000178362 79 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm24088-201ENSMUST00000179100 79 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm5900-201ENSMUST00000179862 375 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm20901-201ENSMUST00000180177 664 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm7654-201ENSMUST00000186738 683 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm20257-202ENSMUST00000188643 130 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm28090-201ENSMUST00000189458 664 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm21647-201ENSMUST00000189755 664 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm44337-201ENSMUST00000196553 114 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm45754-201ENSMUST00000212380 279 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm2829-201ENSMUST00000213121 499 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.69□□□□□ -2.14
Usp28Q5I043 Gm45557-201ENSMUST00000210004 1651 ntBASIC1.69□□□□□ -2.14
Usp28Q5I043 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Usp28Q5I043 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Usp28Q5I043 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Usp28Q5I043 Gm24338-201ENSMUST00000104205 127 ntBASIC1.68□□□□□ -2.14
Usp28Q5I043 Gm22678-201ENSMUST00000116974 101 ntBASIC1.68□□□□□ -2.14
Usp28Q5I043 Gm5396-201ENSMUST00000121222 532 ntBASIC1.68□□□□□ -2.14
Usp28Q5I043 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Usp28Q5I043 Gm25658-201ENSMUST00000158472 128 ntBASIC1.68□□□□□ -2.14
Usp28Q5I043 Gm3027-201ENSMUST00000167579 451 ntBASIC1.68□□□□□ -2.14
Usp28Q5I043 Gm23186-201ENSMUST00000180078 107 ntBASIC1.68□□□□□ -2.14
Usp28Q5I043 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.68□□□□□ -2.14
Usp28Q5I043 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.68□□□□□ -2.14
Usp28Q5I043 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Usp28Q5I043 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Usp28Q5I043 Gm13885-201ENSMUST00000117569 187 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms