Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm27599-201ENSMUST00000183758 174 ntBASIC-0.41□□□□□ -2.48
Ccdc88bQ4QRL3 Gm29037-201ENSMUST00000189092 313 ntBASIC-0.41□□□□□ -2.48
Ccdc88bQ4QRL3 Gm17911-201ENSMUST00000210806 877 ntBASIC-0.41□□□□□ -2.48
Ccdc88bQ4QRL3 Mir599-201ENSMUST00000102378 88 ntBASIC-0.42□□□□□ -2.48
Ccdc88bQ4QRL3 Gm7429-201ENSMUST00000118664 348 ntBASIC-0.42□□□□□ -2.48
Ccdc88bQ4QRL3 Gm24851-201ENSMUST00000158028 103 ntBASIC-0.42□□□□□ -2.48
Ccdc88bQ4QRL3 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC-0.42□□□□□ -2.48
Ccdc88bQ4QRL3 Gm24388-201ENSMUST00000177872 107 ntBASIC-0.42□□□□□ -2.48
Ccdc88bQ4QRL3 AC165092.3-201ENSMUST00000223602 282 ntBASIC-0.42□□□□□ -2.48
Ccdc88bQ4QRL3 AC162857.1-201ENSMUST00000226614 400 ntBASIC-0.42□□□□□ -2.48
Ccdc88bQ4QRL3 Gm22454-201ENSMUST00000082583 107 ntBASIC-0.42□□□□□ -2.48
Ccdc88bQ4QRL3 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC-0.43□□□□□ -2.48
Ccdc88bQ4QRL3 Gm15102-201ENSMUST00000118740 1502 ntBASIC-0.43□□□□□ -2.48
Ccdc88bQ4QRL3 Gm15101-201ENSMUST00000178818 1502 ntBASIC-0.43□□□□□ -2.48
Ccdc88bQ4QRL3 Gm16242-201ENSMUST00000117741 334 ntBASIC-0.43□□□□□ -2.48
Ccdc88bQ4QRL3 Gm24868-201ENSMUST00000157265 136 ntBASIC-0.43□□□□□ -2.48
Ccdc88bQ4QRL3 Gm24077-201ENSMUST00000158183 136 ntBASIC-0.43□□□□□ -2.48
Ccdc88bQ4QRL3 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC-0.43□□□□□ -2.48
Ccdc88bQ4QRL3 Gm42976-201ENSMUST00000200313 222 ntBASIC-0.43□□□□□ -2.48
Ccdc88bQ4QRL3 AC164161.1-201ENSMUST00000214076 639 ntBASIC-0.43□□□□□ -2.48
Ccdc88bQ4QRL3 Gm18160-201ENSMUST00000214279 827 ntBASIC-0.43□□□□□ -2.48
Ccdc88bQ4QRL3 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
Ccdc88bQ4QRL3 Gm23407-201ENSMUST00000082538 91 ntBASIC-0.43□□□□□ -2.48
Ccdc88bQ4QRL3 Gm24948-201ENSMUST00000082866 207 ntBASIC-0.43□□□□□ -2.48
Ccdc88bQ4QRL3 AC164297.1-201ENSMUST00000224484 1561 ntBASIC-0.43□□□□□ -2.48
Ccdc88bQ4QRL3 Gm15379-201ENSMUST00000121224 648 ntBASIC-0.44□□□□□ -2.48
Ccdc88bQ4QRL3 Gm11849-201ENSMUST00000121293 261 ntBASIC-0.44□□□□□ -2.48
Ccdc88bQ4QRL3 Gm24321-201ENSMUST00000175348 80 ntBASIC-0.44□□□□□ -2.48
Ccdc88bQ4QRL3 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
Ccdc88bQ4QRL3 Gm26914-201ENSMUST00000182262 223 ntBASIC-0.44□□□□□ -2.48
Ccdc88bQ4QRL3 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC-0.44□□□□□ -2.48
Ccdc88bQ4QRL3 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC-0.44□□□□□ -2.48
Ccdc88bQ4QRL3 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC-0.44□□□□□ -2.48
Ccdc88bQ4QRL3 Gm18213-201ENSMUST00000207850 178 ntBASIC-0.44□□□□□ -2.48
Ccdc88bQ4QRL3 AC153141.1-201ENSMUST00000218636 501 ntBASIC-0.44□□□□□ -2.48
Ccdc88bQ4QRL3 AC162910.1-201ENSMUST00000221219 1723 ntBASIC-0.44□□□□□ -2.48
Ccdc88bQ4QRL3 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC-0.44□□□□□ -2.48
Ccdc88bQ4QRL3 Gm23629-201ENSMUST00000082465 107 ntBASIC-0.44□□□□□ -2.48
Ccdc88bQ4QRL3 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC-0.45□□□□□ -2.48
Ccdc88bQ4QRL3 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC-0.45□□□□□ -2.48
Ccdc88bQ4QRL3 Gm25914-201ENSMUST00000157618 153 ntBASIC-0.45□□□□□ -2.48
Ccdc88bQ4QRL3 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC-0.45□□□□□ -2.48
Ccdc88bQ4QRL3 Gm27588-201ENSMUST00000185096 263 ntBASIC-0.45□□□□□ -2.48
Ccdc88bQ4QRL3 Gm29350-201ENSMUST00000189141 541 ntBASIC-0.45□□□□□ -2.48
Ccdc88bQ4QRL3 Gm9156-201ENSMUST00000189660 463 ntBASIC-0.45□□□□□ -2.48
Ccdc88bQ4QRL3 Gm37727-201ENSMUST00000191637 819 ntBASIC-0.45□□□□□ -2.48
Ccdc88bQ4QRL3 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC-0.45□□□□□ -2.48
Ccdc88bQ4QRL3 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC-0.45□□□□□ -2.48
Ccdc88bQ4QRL3 Gm26128-201ENSMUST00000083170 110 ntBASIC-0.45□□□□□ -2.48
Ccdc88bQ4QRL3 Mir466f-1-201ENSMUST00000104779 94 ntBASIC-0.46□□□□□ -2.48
Ccdc88bQ4QRL3 Gm25162-201ENSMUST00000158906 159 ntBASIC-0.46□□□□□ -2.48
Ccdc88bQ4QRL3 Gm28666-201ENSMUST00000186649 274 ntBASIC-0.46□□□□□ -2.48
Ccdc88bQ4QRL3 Gm42739-201ENSMUST00000200687 226 ntBASIC-0.46□□□□□ -2.48
Ccdc88bQ4QRL3 Gm45689-201ENSMUST00000210522 133 ntBASIC-0.46□□□□□ -2.48
Ccdc88bQ4QRL3 AC153864.2-201ENSMUST00000220424 292 ntBASIC-0.46□□□□□ -2.48
Ccdc88bQ4QRL3 Gm26439-201ENSMUST00000082592 106 ntBASIC-0.46□□□□□ -2.48
Ccdc88bQ4QRL3 Snord85-201ENSMUST00000083262 73 ntBASIC-0.46□□□□□ -2.48
Ccdc88bQ4QRL3 Gm43924-201ENSMUST00000204851 1736 ntBASIC-0.47□□□□□ -2.48
Ccdc88bQ4QRL3 Gm25706-201ENSMUST00000157828 247 ntBASIC-0.47□□□□□ -2.48
Ccdc88bQ4QRL3 Gm37330-201ENSMUST00000192606 153 ntBASIC-0.47□□□□□ -2.48
Ccdc88bQ4QRL3 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC-0.47□□□□□ -2.48
Ccdc88bQ4QRL3 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC-0.47□□□□□ -2.48
Ccdc88bQ4QRL3 AC173482.4-201ENSMUST00000225096 348 ntBASIC-0.47□□□□□ -2.48
Ccdc88bQ4QRL3 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 Gm43529-201ENSMUST00000199178 412 ntBASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 AL669916.3-201ENSMUST00000213855 94 ntBASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 AL669916.6-201ENSMUST00000214610 94 ntBASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 AL929285.1-201ENSMUST00000215522 229 ntBASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 AL669916.4-201ENSMUST00000215976 94 ntBASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 AL669916.1-201ENSMUST00000217640 94 ntBASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 AC158392.1-201ENSMUST00000223720 1069 ntBASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 Mir28b-201ENSMUST00000175399 80 ntBASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 Gm28755-201ENSMUST00000185773 199 ntBASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 Gm37319-201ENSMUST00000193500 636 ntBASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 Gm23851-201ENSMUST00000083831 103 ntBASIC-0.48□□□□□ -2.49
Ccdc88bQ4QRL3 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm14792-201ENSMUST00000119725 258 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm25149-201ENSMUST00000157119 82 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm28560-201ENSMUST00000186091 315 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm28334-201ENSMUST00000186653 315 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm28495-201ENSMUST00000188452 315 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm28232-201ENSMUST00000188683 315 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm28481-201ENSMUST00000189231 315 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm29059-201ENSMUST00000191534 315 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm37765-201ENSMUST00000192395 315 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm37237-201ENSMUST00000192893 315 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm36968-201ENSMUST00000193737 315 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm38290-201ENSMUST00000195238 315 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm43220-201ENSMUST00000199299 282 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm44041-201ENSMUST00000203678 396 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm45617-201ENSMUST00000211132 209 ntBASIC-0.49□□□□□ -2.49
Ccdc88bQ4QRL3 Gm26395-201ENSMUST00000104094 132 ntBASIC-0.5□□□□□ -2.49
Ccdc88bQ4QRL3 Gm14129-201ENSMUST00000122436 291 ntBASIC-0.5□□□□□ -2.49
Ccdc88bQ4QRL3 Gm3221-201ENSMUST00000164869 440 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms