Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm18991-201ENSMUST00000209225 746 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm7240-201ENSMUST00000220769 664 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
Trim40Q3UWA4 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Mir30d-201ENSMUST00000083503 82 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Mir301-201ENSMUST00000083655 86 ntBASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Trim40Q3UWA4 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Gm23142-201ENSMUST00000101848 105 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Gm26240-201ENSMUST00000101893 105 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Gm23747-201ENSMUST00000104228 131 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Gm24982-201ENSMUST00000104456 132 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Gm24627-201ENSMUST00000122764 138 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Gm23813-201ENSMUST00000175153 77 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Gm27991-201ENSMUST00000184804 137 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Gm28848-201ENSMUST00000189984 168 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Gm43914-201ENSMUST00000203592 594 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Gm44182-201ENSMUST00000204052 115 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 AC158622.1-201ENSMUST00000217107 230 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 AC138290.2-201ENSMUST00000218822 369 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 AC122905.2-201ENSMUST00000220325 269 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Snord68-201ENSMUST00000082516 86 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Gm25937-201ENSMUST00000083912 107 ntBASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
Trim40Q3UWA4 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Gm11859-201ENSMUST00000118099 455 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Gm11935-201ENSMUST00000118608 399 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Gm14307-201ENSMUST00000118930 291 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Gm14297-201ENSMUST00000129110 291 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Gm16362-201ENSMUST00000135189 214 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Gm16358-201ENSMUST00000146046 210 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Gm25888-201ENSMUST00000157778 302 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Mir6951-201ENSMUST00000183910 75 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Gm44010-201ENSMUST00000204432 331 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Gm44960-201ENSMUST00000207403 141 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Gm44938-201ENSMUST00000208614 427 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Gm19572-201ENSMUST00000214326 338 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Gm25079-201ENSMUST00000082529 203 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.94□□□□□ -2.1
Trim40Q3UWA4 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.94□□□□□ -2.1
Trim40Q3UWA4 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm13432-201ENSMUST00000118861 241 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm15067-201ENSMUST00000119534 156 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm13729-201ENSMUST00000120328 406 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm12785-201ENSMUST00000122052 172 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm15365-201ENSMUST00000122392 300 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm23889-201ENSMUST00000122689 104 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm23779-201ENSMUST00000157938 64 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm24075-201ENSMUST00000158175 72 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Snord11-201ENSMUST00000158468 84 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm24770-201ENSMUST00000158505 92 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm7592-201ENSMUST00000160674 627 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Mir3075-201ENSMUST00000175340 85 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm25284-201ENSMUST00000180345 141 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm27249-201ENSMUST00000185049 328 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm28900-201ENSMUST00000185232 156 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm28995-201ENSMUST00000186625 261 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm37404-201ENSMUST00000195726 359 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm22062-201ENSMUST00000082563 107 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm22685-201ENSMUST00000082848 106 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Gm25512-201ENSMUST00000083863 107 ntBASIC1.93□□□□□ -2.1
Trim40Q3UWA4 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm22494-201ENSMUST00000104495 128 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm13885-201ENSMUST00000117569 187 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm15215-201ENSMUST00000117773 489 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm25658-201ENSMUST00000158472 128 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm25488-201ENSMUST00000158728 118 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm24573-201ENSMUST00000175499 112 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm24308-201ENSMUST00000177773 114 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm25933-201ENSMUST00000178943 108 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm28418-201ENSMUST00000186179 423 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Mir6925-201ENSMUST00000197857 70 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm44429-201ENSMUST00000203542 186 ntBASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC1.92□□□□□ -2.1
Trim40Q3UWA4 Gm45386-201ENSMUST00000210194 218 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms