Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.7□□□□□ -2.14
Upf3aQ3ULJ3 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.7□□□□□ -2.14
Upf3aQ3ULJ3 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.7□□□□□ -2.14
Upf3aQ3ULJ3 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Upf3aQ3ULJ3 Gm24165-201ENSMUST00000082718 128 ntBASIC1.7□□□□□ -2.14
Upf3aQ3ULJ3 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Upf3aQ3ULJ3 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Gm14215-201ENSMUST00000120578 221 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Gm15115-201ENSMUST00000121145 264 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Gm27510-201ENSMUST00000158214 64 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Mir3086-201ENSMUST00000175072 87 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Gm24084-201ENSMUST00000175173 137 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Gm25020-201ENSMUST00000178071 107 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Gm27326-201ENSMUST00000183504 95 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 AC116589.3-202ENSMUST00000221770 649 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 AC116589.6-201ENSMUST00000222252 649 ntBASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.69□□□□□ -2.14
Upf3aQ3ULJ3 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Mir1949-201ENSMUST00000157434 141 ntBASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Gm24577-201ENSMUST00000158580 63 ntBASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Gm17148-201ENSMUST00000164702 249 ntBASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Gm25994-201ENSMUST00000175392 101 ntBASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Gm26430-201ENSMUST00000178054 107 ntBASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Gm26501-201ENSMUST00000178307 107 ntBASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Mir8116-201ENSMUST00000184134 97 ntBASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Mir195b-201ENSMUST00000184814 97 ntBASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Gm42622-201ENSMUST00000197229 355 ntBASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Gm43739-201ENSMUST00000198294 307 ntBASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Gm46993-201ENSMUST00000220708 259 ntBASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Gm23614-201ENSMUST00000082598 107 ntBASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Upf3aQ3ULJ3 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Gm13885-201ENSMUST00000117569 187 ntBASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Gm13457-201ENSMUST00000117885 267 ntBASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Gm23331-201ENSMUST00000157423 108 ntBASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Gm22386-201ENSMUST00000158192 129 ntBASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Gm26157-201ENSMUST00000158974 126 ntBASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Gm27588-201ENSMUST00000185096 263 ntBASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Gm29167-201ENSMUST00000190024 377 ntBASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Gm37923-201ENSMUST00000191624 161 ntBASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Gm32175-201ENSMUST00000193641 346 ntBASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Gm25207-201ENSMUST00000093745 107 ntBASIC1.67□□□□□ -2.14
Upf3aQ3ULJ3 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.66□□□□□ -2.14
Upf3aQ3ULJ3 Gm24172-201ENSMUST00000104127 117 ntBASIC1.66□□□□□ -2.14
Upf3aQ3ULJ3 Gm13475-201ENSMUST00000119290 234 ntBASIC1.66□□□□□ -2.14
Upf3aQ3ULJ3 Gm24481-201ENSMUST00000157210 102 ntBASIC1.66□□□□□ -2.14
Upf3aQ3ULJ3 Gm25625-201ENSMUST00000157221 96 ntBASIC1.66□□□□□ -2.14
Upf3aQ3ULJ3 Gm24419-201ENSMUST00000157875 332 ntBASIC1.66□□□□□ -2.14
Upf3aQ3ULJ3 Gm25958-201ENSMUST00000175114 71 ntBASIC1.66□□□□□ -2.14
Upf3aQ3ULJ3 Gm43431-201ENSMUST00000198577 340 ntBASIC1.66□□□□□ -2.14
Upf3aQ3ULJ3 Gm45375-201ENSMUST00000210338 280 ntBASIC1.66□□□□□ -2.14
Upf3aQ3ULJ3 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.66□□□□□ -2.14
Upf3aQ3ULJ3 Gm45815-201ENSMUST00000220241 146 ntBASIC1.66□□□□□ -2.14
Upf3aQ3ULJ3 Gm20102-201ENSMUST00000222445 220 ntBASIC1.66□□□□□ -2.14
Upf3aQ3ULJ3 Gm24037-201ENSMUST00000082871 180 ntBASIC1.66□□□□□ -2.14
Upf3aQ3ULJ3 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Upf3aQ3ULJ3 AC133079.1-201ENSMUST00000220943 1881 ntBASIC1.66□□□□□ -2.14
Upf3aQ3ULJ3 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Gm12512-201ENSMUST00000119620 217 ntBASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Gm24211-201ENSMUST00000158264 107 ntBASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Gm23181-201ENSMUST00000158685 110 ntBASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Gm16162-201ENSMUST00000162296 297 ntBASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Mir28b-201ENSMUST00000175399 80 ntBASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Gm27317-201ENSMUST00000183533 95 ntBASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Gm27878-201ENSMUST00000184000 106 ntBASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Gm44465-201ENSMUST00000199536 114 ntBASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Gm26457-201ENSMUST00000082678 78 ntBASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.65□□□□□ -2.15
Upf3aQ3ULJ3 Gm14530-201ENSMUST00000122391 333 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 100.1 ms