Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.89□□□□□ -1.79
Limch1Q3UH68 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Limch1Q3UH68 Gm22978-201ENSMUST00000082607 160 ntBASIC3.89□□□□□ -1.79
Limch1Q3UH68 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Limch1Q3UH68 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.89□□□□□ -1.79
Limch1Q3UH68 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Limch1Q3UH68 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Limch1Q3UH68 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.88□□□□□ -1.79
Limch1Q3UH68 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Limch1Q3UH68 Gm24582-201ENSMUST00000103967 103 ntBASIC3.88□□□□□ -1.79
Limch1Q3UH68 Gm23651-201ENSMUST00000116755 120 ntBASIC3.88□□□□□ -1.79
Limch1Q3UH68 Cr2-206ENSMUST00000193801 206 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Limch1Q3UH68 Gm43932-201ENSMUST00000204499 52 ntBASIC3.88□□□□□ -1.79
Limch1Q3UH68 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.88□□□□□ -1.79
Limch1Q3UH68 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Limch1Q3UH68 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.88□□□□□ -1.79
Limch1Q3UH68 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm14914-201ENSMUST00000117576 2031 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm23256-201ENSMUST00000102235 110 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm26140-201ENSMUST00000103807 110 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm12449-201ENSMUST00000117572 234 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm27396-201ENSMUST00000157708 58 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm22476-201ENSMUST00000158902 100 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm17113-201ENSMUST00000170118 171 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm22908-201ENSMUST00000177620 110 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm27374-201ENSMUST00000183660 81 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm29005-201ENSMUST00000186773 320 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm6003-201ENSMUST00000187903 463 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 Trbv18-201ENSMUST00000194256 294 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm18617-201ENSMUST00000222311 259 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 Gm23722-201ENSMUST00000083002 130 ntBASIC3.87□□□□□ -1.79
Limch1Q3UH68 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Limch1Q3UH68 Gm27047-201ENSMUST00000183072 1819 ntBASIC3.86□□□□□ -1.79
Limch1Q3UH68 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Limch1Q3UH68 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Limch1Q3UH68 Gm26100-201ENSMUST00000157245 127 ntBASIC3.86□□□□□ -1.79
Limch1Q3UH68 Gm24601-201ENSMUST00000157970 143 ntBASIC3.86□□□□□ -1.79
Limch1Q3UH68 Gm27648-201ENSMUST00000184315 107 ntBASIC3.86□□□□□ -1.79
Limch1Q3UH68 Gm44352-201ENSMUST00000196358 110 ntBASIC3.86□□□□□ -1.79
Limch1Q3UH68 Gm33866-201ENSMUST00000196911 289 ntBASIC3.86□□□□□ -1.79
Limch1Q3UH68 Gm43199-201ENSMUST00000200019 307 ntBASIC3.86□□□□□ -1.79
Limch1Q3UH68 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.86□□□□□ -1.79
Limch1Q3UH68 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Limch1Q3UH68 Gm10351-201ENSMUST00000087694 125 ntBASIC3.86□□□□□ -1.79
Limch1Q3UH68 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Limch1Q3UH68 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Limch1Q3UH68 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Limch1Q3UH68 Gm24482-201ENSMUST00000117005 93 ntBASIC3.85□□□□□ -1.79
Limch1Q3UH68 Gm24892-201ENSMUST00000122747 104 ntBASIC3.85□□□□□ -1.79
Limch1Q3UH68 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.85□□□□□ -1.79
Limch1Q3UH68 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.85□□□□□ -1.79
Limch1Q3UH68 AC122834.1-201ENSMUST00000227182 425 ntBASIC3.85□□□□□ -1.79
Limch1Q3UH68 Gm25204-201ENSMUST00000082843 106 ntBASIC3.85□□□□□ -1.79
Limch1Q3UH68 Gm25789-201ENSMUST00000083294 76 ntBASIC3.85□□□□□ -1.79
Limch1Q3UH68 Gm24453-201ENSMUST00000083346 76 ntBASIC3.85□□□□□ -1.79
Limch1Q3UH68 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Limch1Q3UH68 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Limch1Q3UH68 Gm24276-201ENSMUST00000102181 110 ntBASIC3.84□□□□□ -1.79
Limch1Q3UH68 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Limch1Q3UH68 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Limch1Q3UH68 Gm6762-201ENSMUST00000121769 289 ntBASIC3.84□□□□□ -1.79
Limch1Q3UH68 Gm25490-201ENSMUST00000158734 130 ntBASIC3.84□□□□□ -1.79
Limch1Q3UH68 Gm16162-201ENSMUST00000162296 297 ntBASIC3.84□□□□□ -1.79
Limch1Q3UH68 Gm22699-201ENSMUST00000175376 105 ntBASIC3.84□□□□□ -1.79
Limch1Q3UH68 Gm28344-201ENSMUST00000185704 279 ntBASIC3.84□□□□□ -1.79
Limch1Q3UH68 Gm28155-201ENSMUST00000191066 151 ntBASIC3.84□□□□□ -1.79
Limch1Q3UH68 Mir3068-202ENSMUST00000197755 79 ntBASIC3.84□□□□□ -1.79
Limch1Q3UH68 Snora70-201ENSMUST00000083047 137 ntBASIC3.84□□□□□ -1.79
Limch1Q3UH68 Mir29b-2-201ENSMUST00000083478 81 ntBASIC3.84□□□□□ -1.79
Limch1Q3UH68 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.84□□□□□ -1.79
Limch1Q3UH68 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.84□□□□□ -1.8
Limch1Q3UH68 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.84□□□□□ -1.8
Limch1Q3UH68 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Limch1Q3UH68 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Limch1Q3UH68 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Limch1Q3UH68 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Limch1Q3UH68 Gm12926-201ENSMUST00000121158 409 ntBASIC3.83□□□□□ -1.8
Limch1Q3UH68 Gm23476-201ENSMUST00000158881 274 ntBASIC3.83□□□□□ -1.8
Limch1Q3UH68 Gm25198-201ENSMUST00000178574 110 ntBASIC3.83□□□□□ -1.8
Limch1Q3UH68 Mir7k-201ENSMUST00000184115 110 ntBASIC3.83□□□□□ -1.8
Limch1Q3UH68 Gm18433-202ENSMUST00000195682 196 ntBASIC3.83□□□□□ -1.8
Limch1Q3UH68 Gm26265-202ENSMUST00000196326 133 ntBASIC3.83□□□□□ -1.8
Limch1Q3UH68 Gm22304-201ENSMUST00000082688 129 ntBASIC3.83□□□□□ -1.8
Limch1Q3UH68 Gm25856-201ENSMUST00000082786 75 ntBASIC3.83□□□□□ -1.8
Limch1Q3UH68 Gm24705-201ENSMUST00000082808 107 ntBASIC3.83□□□□□ -1.8
Limch1Q3UH68 Gm23136-201ENSMUST00000083425 99 ntBASIC3.83□□□□□ -1.8
Limch1Q3UH68 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Limch1Q3UH68 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.83□□□□□ -1.8
Limch1Q3UH68 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Limch1Q3UH68 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Limch1Q3UH68 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Limch1Q3UH68 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 129.4 ms