Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm28661-201ENSMUST00000188231 681 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Gm42570-201ENSMUST00000195937 292 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Gm19572-201ENSMUST00000214326 338 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.93□□□□□ -2.1
Trafd1Q3UDK1 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Gm13439-201ENSMUST00000117541 409 ntBASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Gm12550-201ENSMUST00000118478 329 ntBASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Gm11798-201ENSMUST00000119150 421 ntBASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Gm13518-201ENSMUST00000120018 233 ntBASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Gm13588-201ENSMUST00000120026 135 ntBASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Gm23670-201ENSMUST00000157469 119 ntBASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Gm25454-201ENSMUST00000157947 315 ntBASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Gm16038-201ENSMUST00000159317 193 ntBASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Gm23793-201ENSMUST00000179396 117 ntBASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Mir6379-201ENSMUST00000183392 115 ntBASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 AC154245.1-201ENSMUST00000224615 601 ntBASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
Trafd1Q3UDK1 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Mir701-201ENSMUST00000102208 109 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Mir758-201ENSMUST00000103260 81 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Gm14624-201ENSMUST00000117746 192 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Gm12304-201ENSMUST00000120312 385 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Gm24478-201ENSMUST00000157439 158 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Gm27396-201ENSMUST00000157708 58 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Gm25384-201ENSMUST00000157807 105 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Gm22483-201ENSMUST00000157986 274 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Mir669n-201ENSMUST00000158636 54 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Gm25020-201ENSMUST00000178071 107 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 AC147240.1-201ENSMUST00000218767 431 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Gm40810-201ENSMUST00000219149 253 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Gm7065-201ENSMUST00000222150 474 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 Gm23721-201ENSMUST00000083005 107 ntBASIC1.91□□□□□ -2.1
Trafd1Q3UDK1 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Gm12646-201ENSMUST00000119144 238 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Gm24892-201ENSMUST00000122747 104 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Trav20-201ENSMUST00000142754 347 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Gm23331-201ENSMUST00000157423 108 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Gm24783-201ENSMUST00000157639 100 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Gm24858-201ENSMUST00000158058 323 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Gm22085-201ENSMUST00000158344 110 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Gm17161-201ENSMUST00000169187 524 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Mir6901-201ENSMUST00000185062 62 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Gm27544-201ENSMUST00000185069 155 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Gm28717-201ENSMUST00000189950 315 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Gm26379-202ENSMUST00000200225 132 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Gm26066-201ENSMUST00000083385 109 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Gm25512-201ENSMUST00000083863 107 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Gm26314-201ENSMUST00000083891 107 ntBASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trafd1Q3UDK1 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Gm26500-201ENSMUST00000101867 106 ntBASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Mir759-201ENSMUST00000103254 98 ntBASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Gm23010-201ENSMUST00000104151 126 ntBASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Gm23109-201ENSMUST00000116867 126 ntBASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Gm14894-201ENSMUST00000117170 270 ntBASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Gm14748-201ENSMUST00000119819 411 ntBASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Gm25269-201ENSMUST00000122601 104 ntBASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Gm29397-201ENSMUST00000185205 333 ntBASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Gm37449-201ENSMUST00000193016 270 ntBASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Gm18658-201ENSMUST00000195558 270 ntBASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Snord68-201ENSMUST00000082516 86 ntBASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Gm25402-201ENSMUST00000082966 131 ntBASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Trafd1Q3UDK1 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm24338-201ENSMUST00000104205 127 ntBASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm22021-201ENSMUST00000104353 107 ntBASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm24984-201ENSMUST00000104454 133 ntBASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm14774-201ENSMUST00000117857 536 ntBASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm14678-201ENSMUST00000121396 482 ntBASIC1.88□□□□□ -2.11
Trafd1Q3UDK1 Gm26255-201ENSMUST00000122492 103 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms