Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mir1904-201ENSMUST00000122702 80 ntBASIC1.22□□□□□ -2.21
Trim43aQ3TL54 Gm23858-201ENSMUST00000158384 106 ntBASIC1.22□□□□□ -2.21
Trim43aQ3TL54 Gm22075-201ENSMUST00000158599 192 ntBASIC1.22□□□□□ -2.21
Trim43aQ3TL54 Traj60-201ENSMUST00000167781 54 ntBASIC1.22□□□□□ -2.21
Trim43aQ3TL54 Gm22129-201ENSMUST00000179034 107 ntBASIC1.22□□□□□ -2.21
Trim43aQ3TL54 Mir7063-201ENSMUST00000184158 91 ntBASIC1.22□□□□□ -2.21
Trim43aQ3TL54 Mir496b-201ENSMUST00000184935 113 ntBASIC1.22□□□□□ -2.21
Trim43aQ3TL54 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Trim43aQ3TL54 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.22□□□□□ -2.21
Trim43aQ3TL54 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.22□□□□□ -2.21
Trim43aQ3TL54 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Trim43aQ3TL54 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.22□□□□□ -2.21
Trim43aQ3TL54 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.22□□□□□ -2.21
Trim43aQ3TL54 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Trim43aQ3TL54 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Trim43aQ3TL54 Gm26384-201ENSMUST00000102183 110 ntBASIC1.21□□□□□ -2.22
Trim43aQ3TL54 Gm22673-201ENSMUST00000104415 131 ntBASIC1.21□□□□□ -2.22
Trim43aQ3TL54 Gm12053-201ENSMUST00000119022 252 ntBASIC1.21□□□□□ -2.22
Trim43aQ3TL54 Gm25269-201ENSMUST00000122601 104 ntBASIC1.21□□□□□ -2.22
Trim43aQ3TL54 Gm8121-201ENSMUST00000153583 499 ntBASIC1.21□□□□□ -2.22
Trim43aQ3TL54 Gm24241-201ENSMUST00000157787 145 ntBASIC1.21□□□□□ -2.22
Trim43aQ3TL54 Mir1967-201ENSMUST00000157789 82 ntBASIC1.21□□□□□ -2.22
Trim43aQ3TL54 Gm24229-201ENSMUST00000158830 118 ntBASIC1.21□□□□□ -2.22
Trim43aQ3TL54 Gm25956-201ENSMUST00000175115 217 ntBASIC1.21□□□□□ -2.22
Trim43aQ3TL54 Gm35212-201ENSMUST00000196672 606 ntBASIC1.21□□□□□ -2.22
Trim43aQ3TL54 Gm43199-201ENSMUST00000200019 307 ntBASIC1.21□□□□□ -2.22
Trim43aQ3TL54 Snord14a-201ENSMUST00000082807 87 ntBASIC1.21□□□□□ -2.22
Trim43aQ3TL54 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Trim43aQ3TL54 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trim43aQ3TL54 Gm13672-201ENSMUST00000117554 459 ntBASIC1.2□□□□□ -2.22
Trim43aQ3TL54 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Trim43aQ3TL54 Gm23725-201ENSMUST00000177876 107 ntBASIC1.2□□□□□ -2.22
Trim43aQ3TL54 Gm26652-202ENSMUST00000181672 475 ntBASIC1.2□□□□□ -2.22
Trim43aQ3TL54 Mir6388-201ENSMUST00000184417 75 ntBASIC1.2□□□□□ -2.22
Trim43aQ3TL54 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
Trim43aQ3TL54 Gm37869-201ENSMUST00000193385 595 ntBASIC1.2□□□□□ -2.22
Trim43aQ3TL54 Gm42570-201ENSMUST00000195937 292 ntBASIC1.2□□□□□ -2.22
Trim43aQ3TL54 Gm34139-201ENSMUST00000196166 294 ntBASIC1.2□□□□□ -2.22
Trim43aQ3TL54 Gm45375-201ENSMUST00000210338 280 ntBASIC1.2□□□□□ -2.22
Trim43aQ3TL54 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.2□□□□□ -2.22
Trim43aQ3TL54 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.2□□□□□ -2.22
Trim43aQ3TL54 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.2□□□□□ -2.22
Trim43aQ3TL54 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm12417-201ENSMUST00000119153 403 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm15861-201ENSMUST00000120979 339 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm14362-201ENSMUST00000121679 273 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm15254-201ENSMUST00000149567 273 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm23328-201ENSMUST00000157418 132 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Mir3057-201ENSMUST00000175040 91 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm23090-201ENSMUST00000177331 78 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm27419-201ENSMUST00000184576 109 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm28926-201ENSMUST00000191063 680 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm18546-201ENSMUST00000197245 676 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm44655-201ENSMUST00000207768 423 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm18854-201ENSMUST00000211196 329 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 AC153968.2-201ENSMUST00000215579 1140 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm40810-201ENSMUST00000219149 253 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm23093-201ENSMUST00000083450 102 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Snord38a-201ENSMUST00000083746 71 ntBASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Trim43aQ3TL54 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Gm12432-201ENSMUST00000119540 186 ntBASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Gm24777-201ENSMUST00000157644 107 ntBASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Gm25384-201ENSMUST00000157807 105 ntBASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Mir8119-201ENSMUST00000183371 129 ntBASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Gm28437-201ENSMUST00000190277 783 ntBASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Gm43556-201ENSMUST00000196186 681 ntBASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Mir691-201ENSMUST00000199719 78 ntBASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.18□□□□□ -2.22
Trim43aQ3TL54 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.18□□□□□ -2.22
Trim43aQ3TL54 AC162934.3-201ENSMUST00000223015 841 ntBASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Gm10092-201ENSMUST00000077110 180 ntBASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.18□□□□□ -2.22
Trim43aQ3TL54 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
Trim43aQ3TL54 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.17□□□□□ -2.22
Trim43aQ3TL54 Mir743b-201ENSMUST00000104751 77 ntBASIC1.17□□□□□ -2.22
Trim43aQ3TL54 Gm26301-201ENSMUST00000104813 95 ntBASIC1.17□□□□□ -2.22
Trim43aQ3TL54 Gm14923-201ENSMUST00000118270 155 ntBASIC1.17□□□□□ -2.22
Trim43aQ3TL54 Gm15443-201ENSMUST00000118947 820 ntBASIC1.17□□□□□ -2.22
Trim43aQ3TL54 Gm11606-201ENSMUST00000120706 617 ntBASIC1.17□□□□□ -2.22
Trim43aQ3TL54 Gm14972-201ENSMUST00000121780 364 ntBASIC1.17□□□□□ -2.22
Trim43aQ3TL54 Gm24851-201ENSMUST00000158028 103 ntBASIC1.17□□□□□ -2.22
Trim43aQ3TL54 Gm20438-201ENSMUST00000174441 329 ntBASIC1.17□□□□□ -2.22
Trim43aQ3TL54 Gm24084-201ENSMUST00000175173 137 ntBASIC1.17□□□□□ -2.22
Trim43aQ3TL54 Gm22510-201ENSMUST00000179304 79 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 137.9 ms