Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm37672-201ENSMUST00000192682 4014 ntBASIC2.98□□□□□ -1.93
Col8a1Q00780 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Col8a1Q00780 Gm13831-201ENSMUST00000118764 302 ntBASIC2.98□□□□□ -1.93
Col8a1Q00780 Gm13155-201ENSMUST00000119277 646 ntBASIC2.98□□□□□ -1.93
Col8a1Q00780 Gm8178-201ENSMUST00000121570 646 ntBASIC2.98□□□□□ -1.93
Col8a1Q00780 Gm24916-201ENSMUST00000157287 79 ntBASIC2.98□□□□□ -1.93
Col8a1Q00780 Gm27374-201ENSMUST00000183660 81 ntBASIC2.98□□□□□ -1.93
Col8a1Q00780 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC2.98□□□□□ -1.93
Col8a1Q00780 Gm29167-201ENSMUST00000190024 377 ntBASIC2.98□□□□□ -1.93
Col8a1Q00780 Gm39147-201ENSMUST00000211376 465 ntBASIC2.98□□□□□ -1.93
Col8a1Q00780 Snora31-201ENSMUST00000083213 130 ntBASIC2.98□□□□□ -1.93
Col8a1Q00780 Snord14d-201ENSMUST00000083424 86 ntBASIC2.98□□□□□ -1.93
Col8a1Q00780 Gm10172-201ENSMUST00000085929 558 ntBASIC2.98□□□□□ -1.93
Col8a1Q00780 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
Col8a1Q00780 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Col8a1Q00780 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Col8a1Q00780 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Col8a1Q00780 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Col8a1Q00780 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Col8a1Q00780 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Col8a1Q00780 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 Gm22477-201ENSMUST00000122569 316 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 Gm24010-201ENSMUST00000157731 282 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 Gm25373-201ENSMUST00000158156 115 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.97□□□□□ -1.93
Col8a1Q00780 Gm17113-201ENSMUST00000170118 171 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 Mir6715-201ENSMUST00000184990 57 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 Gm37085-201ENSMUST00000193780 196 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 Gm38356-201ENSMUST00000194313 408 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 Gm43680-201ENSMUST00000199466 340 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 Gm45116-201ENSMUST00000207392 275 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 CT030645.1-201ENSMUST00000224020 231 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 AC124400.1-201ENSMUST00000225779 193 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 Gm24453-201ENSMUST00000083346 76 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 Gm22681-201ENSMUST00000083853 106 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 Snord15a-201ENSMUST00000083888 148 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 Gm23947-201ENSMUST00000093636 107 ntBASIC2.97□□□□□ -1.93
Col8a1Q00780 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Col8a1Q00780 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Col8a1Q00780 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
Col8a1Q00780 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
Col8a1Q00780 Gm7470-201ENSMUST00000194219 2095 ntBASIC2.96□□□□□ -1.94
Col8a1Q00780 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.96□□□□□ -1.94
Col8a1Q00780 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC2.96□□□□□ -1.94
Col8a1Q00780 Gm25377-201ENSMUST00000104334 129 ntBASIC2.96□□□□□ -1.94
Col8a1Q00780 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC2.96□□□□□ -1.94
Col8a1Q00780 Gm12934-201ENSMUST00000119221 343 ntBASIC2.96□□□□□ -1.94
Col8a1Q00780 Gm22956-201ENSMUST00000122520 80 ntBASIC2.96□□□□□ -1.94
Col8a1Q00780 Gm24086-201ENSMUST00000175171 98 ntBASIC2.96□□□□□ -1.94
Col8a1Q00780 Gm28155-201ENSMUST00000191066 151 ntBASIC2.96□□□□□ -1.94
Col8a1Q00780 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Col8a1Q00780 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.96□□□□□ -1.94
Col8a1Q00780 Gm46233-201ENSMUST00000217831 449 ntBASIC2.96□□□□□ -1.94
Col8a1Q00780 Gm23615-201ENSMUST00000082602 65 ntBASIC2.96□□□□□ -1.94
Col8a1Q00780 Mir488-201ENSMUST00000093595 109 ntBASIC2.96□□□□□ -1.94
Col8a1Q00780 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Col8a1Q00780 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC2.96□□□□□ -1.94
Col8a1Q00780 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
Col8a1Q00780 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC2.96□□□□□ -1.94
Col8a1Q00780 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC2.96□□□□□ -1.94
Col8a1Q00780 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
Col8a1Q00780 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.96□□□□□ -1.94
Col8a1Q00780 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC2.95□□□□□ -1.94
Col8a1Q00780 AC153964.2-201ENSMUST00000217704 2474 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm5762-201ENSMUST00000119204 258 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm14402-201ENSMUST00000122217 508 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm14389-201ENSMUST00000140453 241 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm22034-201ENSMUST00000157283 134 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm26049-201ENSMUST00000157313 108 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm24717-201ENSMUST00000157522 124 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm26482-201ENSMUST00000158015 62 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm25267-201ENSMUST00000158522 63 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm25380-201ENSMUST00000175463 107 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm24641-201ENSMUST00000178055 107 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm25484-201ENSMUST00000178217 107 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm22910-201ENSMUST00000178568 132 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm26138-201ENSMUST00000179236 107 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm22821-201ENSMUST00000179288 107 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm27520-201ENSMUST00000184872 81 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm44352-201ENSMUST00000196358 110 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm18982-201ENSMUST00000198118 529 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm5010-201ENSMUST00000213131 260 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 mt-Tf-201ENSMUST00000082387 68 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm23140-201ENSMUST00000082487 107 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm22509-201ENSMUST00000082775 107 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm23298-201ENSMUST00000083181 107 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm24614-201ENSMUST00000083269 107 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm22057-201ENSMUST00000083387 107 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm25516-201ENSMUST00000083857 107 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm45809-201ENSMUST00000211661 3894 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
Col8a1Q00780 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
Col8a1Q00780 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.95□□□□□ -1.94
Col8a1Q00780 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Col8a1Q00780 Gm14626-201ENSMUST00000117619 216 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms