Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.7□□□□□ -1.98
Lig3P97386 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.7□□□□□ -1.98
Lig3P97386 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.7□□□□□ -1.98
Lig3P97386 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Lig3P97386 Gm24948-201ENSMUST00000082866 207 ntBASIC2.7□□□□□ -1.98
Lig3P97386 Gm22169-201ENSMUST00000083229 107 ntBASIC2.7□□□□□ -1.98
Lig3P97386 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.7□□□□□ -1.98
Lig3P97386 AC164297.1-201ENSMUST00000224484 1561 ntBASIC2.7□□□□□ -1.98
Lig3P97386 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Lig3P97386 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.69□□□□□ -1.98
Lig3P97386 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Lig3P97386 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.69□□□□□ -1.98
Lig3P97386 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Lig3P97386 n-R5s87-201ENSMUST00000122752 116 ntBASIC2.69□□□□□ -1.98
Lig3P97386 Gm23670-201ENSMUST00000157469 119 ntBASIC2.69□□□□□ -1.98
Lig3P97386 Gm24997-201ENSMUST00000157910 105 ntBASIC2.69□□□□□ -1.98
Lig3P97386 Gm23258-201ENSMUST00000158319 106 ntBASIC2.69□□□□□ -1.98
Lig3P97386 Gm24501-201ENSMUST00000158452 62 ntBASIC2.69□□□□□ -1.98
Lig3P97386 Gm23864-201ENSMUST00000177607 107 ntBASIC2.69□□□□□ -1.98
Lig3P97386 Gm27997-201ENSMUST00000184942 69 ntBASIC2.69□□□□□ -1.98
Lig3P97386 Gm37746-201ENSMUST00000193249 198 ntBASIC2.69□□□□□ -1.98
Lig3P97386 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.69□□□□□ -1.98
Lig3P97386 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.69□□□□□ -1.98
Lig3P97386 mt-Ti-201ENSMUST00000082393 69 ntBASIC2.69□□□□□ -1.98
Lig3P97386 Gm25636-201ENSMUST00000082666 133 ntBASIC2.69□□□□□ -1.98
Lig3P97386 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.69□□□□□ -1.98
Lig3P97386 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
Lig3P97386 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Lig3P97386 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.68□□□□□ -1.98
Lig3P97386 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.68□□□□□ -1.98
Lig3P97386 Gm24959-201ENSMUST00000157924 146 ntBASIC2.68□□□□□ -1.98
Lig3P97386 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.68□□□□□ -1.98
Lig3P97386 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.68□□□□□ -1.98
Lig3P97386 Mir6338-201ENSMUST00000183389 109 ntBASIC2.68□□□□□ -1.98
Lig3P97386 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.68□□□□□ -1.98
Lig3P97386 Gm37377-201ENSMUST00000191733 304 ntBASIC2.68□□□□□ -1.98
Lig3P97386 Gm43626-201ENSMUST00000198575 162 ntBASIC2.68□□□□□ -1.98
Lig3P97386 Gm43529-201ENSMUST00000199178 412 ntBASIC2.68□□□□□ -1.98
Lig3P97386 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC2.68□□□□□ -1.98
Lig3P97386 Gm43955-201ENSMUST00000204332 142 ntBASIC2.68□□□□□ -1.98
Lig3P97386 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.68□□□□□ -1.98
Lig3P97386 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC2.68□□□□□ -1.98
Lig3P97386 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.68□□□□□ -1.98
Lig3P97386 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.68□□□□□ -1.98
Lig3P97386 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.68□□□□□ -1.98
Lig3P97386 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.68□□□□□ -1.98
Lig3P97386 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Lig3P97386 Gm26457-201ENSMUST00000082678 78 ntBASIC2.68□□□□□ -1.98
Lig3P97386 Mir423-201ENSMUST00000083584 109 ntBASIC2.68□□□□□ -1.98
Lig3P97386 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Lig3P97386 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Lig3P97386 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Lig3P97386 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Lig3P97386 Mir344e-201ENSMUST00000104677 66 ntBASIC2.67□□□□□ -1.98
Lig3P97386 Gm24683-201ENSMUST00000104840 88 ntBASIC2.67□□□□□ -1.98
Lig3P97386 Gm11460-201ENSMUST00000118200 361 ntBASIC2.67□□□□□ -1.98
Lig3P97386 Gm24481-201ENSMUST00000157210 102 ntBASIC2.67□□□□□ -1.98
Lig3P97386 Gm26414-201ENSMUST00000157674 269 ntBASIC2.67□□□□□ -1.98
Lig3P97386 Gm23190-201ENSMUST00000180307 64 ntBASIC2.67□□□□□ -1.98
Lig3P97386 Mir6346-201ENSMUST00000183982 81 ntBASIC2.67□□□□□ -1.98
Lig3P97386 Gm43722-201ENSMUST00000196054 124 ntBASIC2.67□□□□□ -1.98
Lig3P97386 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.67□□□□□ -1.98
Lig3P97386 Mir6925-201ENSMUST00000197857 70 ntBASIC2.67□□□□□ -1.98
Lig3P97386 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.67□□□□□ -1.98
Lig3P97386 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.67□□□□□ -1.98
Lig3P97386 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.67□□□□□ -1.98
Lig3P97386 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.67□□□□□ -1.98
Lig3P97386 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.67□□□□□ -1.98
Lig3P97386 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.67□□□□□ -1.98
Lig3P97386 Gm26225-201ENSMUST00000082508 135 ntBASIC2.67□□□□□ -1.98
Lig3P97386 Gm25130-201ENSMUST00000082650 156 ntBASIC2.67□□□□□ -1.98
Lig3P97386 Gm22685-201ENSMUST00000082848 106 ntBASIC2.67□□□□□ -1.98
Lig3P97386 Gm23042-201ENSMUST00000083866 101 ntBASIC2.67□□□□□ -1.98
Lig3P97386 Gm24630-201ENSMUST00000122768 106 ntBASIC2.66□□□□□ -1.98
Lig3P97386 Gm25362-201ENSMUST00000158854 105 ntBASIC2.66□□□□□ -1.98
Lig3P97386 Gm8292-201ENSMUST00000162574 396 ntBASIC2.66□□□□□ -1.98
Lig3P97386 Gm29429-201ENSMUST00000187071 121 ntBASIC2.66□□□□□ -1.98
Lig3P97386 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC2.66□□□□□ -1.98
Lig3P97386 Gm45315-201ENSMUST00000209283 333 ntBASIC2.66□□□□□ -1.98
Lig3P97386 Gm45288-201ENSMUST00000210236 151 ntBASIC2.66□□□□□ -1.98
Lig3P97386 Gm45859-201ENSMUST00000212794 214 ntBASIC2.66□□□□□ -1.98
Lig3P97386 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
Lig3P97386 Gm22247-201ENSMUST00000082476 131 ntBASIC2.66□□□□□ -1.98
Lig3P97386 Gm23723-201ENSMUST00000082996 132 ntBASIC2.66□□□□□ -1.98
Lig3P97386 Mir322-201ENSMUST00000083484 95 ntBASIC2.66□□□□□ -1.98
Lig3P97386 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
Lig3P97386 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Lig3P97386 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
Lig3P97386 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.65□□□□□ -1.99
Lig3P97386 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Lig3P97386 Gm15526-201ENSMUST00000112504 204 ntBASIC2.65□□□□□ -1.99
Lig3P97386 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Lig3P97386 Gm15029-201ENSMUST00000119742 199 ntBASIC2.65□□□□□ -1.99
Lig3P97386 Gm11785-201ENSMUST00000120165 601 ntBASIC2.65□□□□□ -1.99
Lig3P97386 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC2.65□□□□□ -1.99
Lig3P97386 Gm12686-201ENSMUST00000120546 397 ntBASIC2.65□□□□□ -1.99
Lig3P97386 Gm22598-201ENSMUST00000157600 127 ntBASIC2.65□□□□□ -1.99
Lig3P97386 Gm26411-201ENSMUST00000157668 107 ntBASIC2.65□□□□□ -1.99
Lig3P97386 Gm23557-201ENSMUST00000157820 138 ntBASIC2.65□□□□□ -1.99
Lig3P97386 Gm22328-201ENSMUST00000158074 112 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 127.1 ms