Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
Shox2P70390 Gm43723-201ENSMUST00000196886 189 ntBASIC1.2□□□□□ -2.22
Shox2P70390 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.2□□□□□ -2.22
Shox2P70390 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Shox2P70390 Gm25589-201ENSMUST00000082502 166 ntBASIC1.2□□□□□ -2.22
Shox2P70390 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC1.2□□□□□ -2.22
Shox2P70390 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.2□□□□□ -2.22
Shox2P70390 Gm25497-201ENSMUST00000104425 132 ntBASIC1.19□□□□□ -2.22
Shox2P70390 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Shox2P70390 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.19□□□□□ -2.22
Shox2P70390 Gm26089-201ENSMUST00000157898 107 ntBASIC1.19□□□□□ -2.22
Shox2P70390 Gm24851-201ENSMUST00000158028 103 ntBASIC1.19□□□□□ -2.22
Shox2P70390 Gm23858-201ENSMUST00000158384 106 ntBASIC1.19□□□□□ -2.22
Shox2P70390 Gm24768-201ENSMUST00000158512 94 ntBASIC1.19□□□□□ -2.22
Shox2P70390 Gm9593-201ENSMUST00000166034 469 ntBASIC1.19□□□□□ -2.22
Shox2P70390 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.19□□□□□ -2.22
Shox2P70390 Gm27607-201ENSMUST00000185162 122 ntBASIC1.19□□□□□ -2.22
Shox2P70390 Gm28917-201ENSMUST00000187294 237 ntBASIC1.19□□□□□ -2.22
Shox2P70390 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.19□□□□□ -2.22
Shox2P70390 Gm28766-201ENSMUST00000191086 234 ntBASIC1.19□□□□□ -2.22
Shox2P70390 Gm37727-201ENSMUST00000191637 819 ntBASIC1.19□□□□□ -2.22
Shox2P70390 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.19□□□□□ -2.22
Shox2P70390 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
Shox2P70390 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Shox2P70390 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Shox2P70390 Gm15266-201ENSMUST00000119635 255 ntBASIC1.18□□□□□ -2.22
Shox2P70390 Gm24892-201ENSMUST00000122747 104 ntBASIC1.18□□□□□ -2.22
Shox2P70390 Gm25059-201ENSMUST00000157367 117 ntBASIC1.18□□□□□ -2.22
Shox2P70390 Gm25956-201ENSMUST00000175115 217 ntBASIC1.18□□□□□ -2.22
Shox2P70390 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Shox2P70390 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Shox2P70390 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
Shox2P70390 Gm11392-201ENSMUST00000181419 710 ntBASIC1.18□□□□□ -2.22
Shox2P70390 Gm37438-201ENSMUST00000192813 393 ntBASIC1.18□□□□□ -2.22
Shox2P70390 Trav5d-2-201ENSMUST00000196107 275 ntBASIC1.18□□□□□ -2.22
Shox2P70390 Gm9402-201ENSMUST00000196849 388 ntBASIC1.18□□□□□ -2.22
Shox2P70390 Trav5n-2-201ENSMUST00000197136 275 ntBASIC1.18□□□□□ -2.22
Shox2P70390 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC1.18□□□□□ -2.22
Shox2P70390 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.18□□□□□ -2.22
Shox2P70390 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.18□□□□□ -2.22
Shox2P70390 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.18□□□□□ -2.22
Shox2P70390 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.18□□□□□ -2.22
Shox2P70390 Gm25404-201ENSMUST00000082970 107 ntBASIC1.18□□□□□ -2.22
Shox2P70390 Snora3-201ENSMUST00000083082 132 ntBASIC1.18□□□□□ -2.22
Shox2P70390 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.18□□□□□ -2.22
Shox2P70390 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Shox2P70390 Gm14972-201ENSMUST00000121780 364 ntBASIC1.17□□□□□ -2.22
Shox2P70390 Gm23120-201ENSMUST00000157654 287 ntBASIC1.17□□□□□ -2.22
Shox2P70390 Gm25958-201ENSMUST00000175114 71 ntBASIC1.17□□□□□ -2.22
Shox2P70390 Gm29397-201ENSMUST00000185205 333 ntBASIC1.17□□□□□ -2.22
Shox2P70390 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.17□□□□□ -2.22
Shox2P70390 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.17□□□□□ -2.22
Shox2P70390 Gm18971-201ENSMUST00000197240 374 ntBASIC1.17□□□□□ -2.22
Shox2P70390 Gm43739-201ENSMUST00000198294 307 ntBASIC1.17□□□□□ -2.22
Shox2P70390 Gm45207-201ENSMUST00000207469 145 ntBASIC1.17□□□□□ -2.22
Shox2P70390 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC1.17□□□□□ -2.22
Shox2P70390 Gm18188-201ENSMUST00000219386 478 ntBASIC1.17□□□□□ -2.22
Shox2P70390 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.17□□□□□ -2.22
Shox2P70390 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.17□□□□□ -2.22
Shox2P70390 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.17□□□□□ -2.22
Shox2P70390 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Shox2P70390 Mir196b-201ENSMUST00000083509 85 ntBASIC1.17□□□□□ -2.22
Shox2P70390 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Shox2P70390 Gm25759-201ENSMUST00000103988 129 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Gm23907-201ENSMUST00000104595 189 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Gm11606-201ENSMUST00000120706 617 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.16□□□□□ -2.22
Shox2P70390 Gm23170-201ENSMUST00000157158 106 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Gm20613-201ENSMUST00000175828 345 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Gm22851-201ENSMUST00000178741 94 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Gm25074-201ENSMUST00000178782 94 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Zfp950-206ENSMUST00000178819 171 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Gm27419-201ENSMUST00000184576 109 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Gm37599-201ENSMUST00000193067 489 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Gm18546-201ENSMUST00000197245 676 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Gm44654-201ENSMUST00000208052 329 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Gm44910-201ENSMUST00000208451 396 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Gm45375-201ENSMUST00000210338 280 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Gm45907-201ENSMUST00000213023 193 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Shox2P70390 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.16□□□□□ -2.22
Shox2P70390 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Shox2P70390 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Shox2P70390 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.15□□□□□ -2.23
Shox2P70390 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Shox2P70390 Gm24517-201ENSMUST00000122560 107 ntBASIC1.15□□□□□ -2.23
Shox2P70390 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.15□□□□□ -2.23
Shox2P70390 Mir3057-201ENSMUST00000175040 91 ntBASIC1.15□□□□□ -2.23
Shox2P70390 Gm25247-201ENSMUST00000175475 90 ntBASIC1.15□□□□□ -2.23
Shox2P70390 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.15□□□□□ -2.23
Shox2P70390 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.15□□□□□ -2.23
Shox2P70390 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Shox2P70390 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Shox2P70390 Gm44449-201ENSMUST00000203610 153 ntBASIC1.15□□□□□ -2.23
Shox2P70390 Gm45268-201ENSMUST00000210046 370 ntBASIC1.15□□□□□ -2.23
Shox2P70390 Gm2628-201ENSMUST00000218019 426 ntBASIC1.15□□□□□ -2.23
Shox2P70390 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.15□□□□□ -2.23
Shox2P70390 Gm21937-201ENSMUST00000222825 218 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms