Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Gm19932-201ENSMUST00000177033 313 ntBASIC1.55□□□□□ -2.16
Ufd1P70362 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC1.55□□□□□ -2.16
Ufd1P70362 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC1.55□□□□□ -2.16
Ufd1P70362 Gm43723-201ENSMUST00000196886 189 ntBASIC1.55□□□□□ -2.16
Ufd1P70362 Gm43587-201ENSMUST00000199590 204 ntBASIC1.55□□□□□ -2.16
Ufd1P70362 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Ufd1P70362 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.55□□□□□ -2.16
Ufd1P70362 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC1.55□□□□□ -2.16
Ufd1P70362 CT485612.2-201ENSMUST00000223014 151 ntBASIC1.55□□□□□ -2.16
Ufd1P70362 AC167140.1-201ENSMUST00000224710 403 ntBASIC1.55□□□□□ -2.16
Ufd1P70362 Gm24977-201ENSMUST00000083106 163 ntBASIC1.55□□□□□ -2.16
Ufd1P70362 Gm42801-201ENSMUST00000202562 2865 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Gm24079-201ENSMUST00000104352 132 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Gm11512-201ENSMUST00000119669 663 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Gm22217-201ENSMUST00000157556 313 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Gm24691-201ENSMUST00000157762 140 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Gm22768-201ENSMUST00000158366 153 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Gm20438-201ENSMUST00000174441 329 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Gm24810-201ENSMUST00000175317 70 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Mir3075-201ENSMUST00000175340 85 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Gm23660-201ENSMUST00000178362 79 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Gm24088-201ENSMUST00000179100 79 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC1.54□□□□□ -2.16
Ufd1P70362 Gm28900-201ENSMUST00000185232 156 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Gm19901-201ENSMUST00000192191 495 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Gm32175-201ENSMUST00000193641 346 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Gm18546-201ENSMUST00000197245 676 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Ufd1P70362 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.54□□□□□ -2.16
Ufd1P70362 Gm45119-201ENSMUST00000207612 199 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Gm45704-201ENSMUST00000212582 403 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.54□□□□□ -2.16
Ufd1P70362 AC122834.1-201ENSMUST00000227182 425 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Snord68-201ENSMUST00000082516 86 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Mir340-201ENSMUST00000083483 98 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Mir429-201ENSMUST00000083493 83 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 AC154386.1-201ENSMUST00000222753 2871 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.54□□□□□ -2.16
Ufd1P70362 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.54□□□□□ -2.16
Ufd1P70362 Gm13439-201ENSMUST00000117541 409 ntBASIC1.53□□□□□ -2.16
Ufd1P70362 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC1.53□□□□□ -2.16
Ufd1P70362 Gm23172-201ENSMUST00000157160 124 ntBASIC1.53□□□□□ -2.16
Ufd1P70362 Gm22435-201ENSMUST00000158552 128 ntBASIC1.53□□□□□ -2.16
Ufd1P70362 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC1.53□□□□□ -2.16
Ufd1P70362 Snord87-201ENSMUST00000175437 87 ntBASIC1.53□□□□□ -2.16
Ufd1P70362 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ufd1P70362 Gm27265-201ENSMUST00000183559 77 ntBASIC1.53□□□□□ -2.16
Ufd1P70362 Mir7241-201ENSMUST00000184532 64 ntBASIC1.53□□□□□ -2.16
Ufd1P70362 Gm29397-201ENSMUST00000185205 333 ntBASIC1.53□□□□□ -2.16
Ufd1P70362 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.53□□□□□ -2.16
Ufd1P70362 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.53□□□□□ -2.16
Ufd1P70362 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Ufd1P70362 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.53□□□□□ -2.16
Ufd1P70362 AC166358.7-201ENSMUST00000221132 108 ntBASIC1.53□□□□□ -2.16
Ufd1P70362 Gm33654-201ENSMUST00000221704 215 ntBASIC1.53□□□□□ -2.16
Ufd1P70362 AC125543.5-201ENSMUST00000222799 108 ntBASIC1.53□□□□□ -2.16
Ufd1P70362 Gm21937-201ENSMUST00000222825 218 ntBASIC1.53□□□□□ -2.16
Ufd1P70362 Gm22972-201ENSMUST00000083297 131 ntBASIC1.53□□□□□ -2.16
Ufd1P70362 Gm26164-201ENSMUST00000083793 104 ntBASIC1.53□□□□□ -2.16
Ufd1P70362 Gm10360-201ENSMUST00000097219 272 ntBASIC1.53□□□□□ -2.16
Ufd1P70362 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Ufd1P70362 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC1.52□□□□□ -2.17
Ufd1P70362 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.52□□□□□ -2.17
Ufd1P70362 Gm42755-201ENSMUST00000198533 1493 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Gm26396-201ENSMUST00000104093 132 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Gm24122-201ENSMUST00000104107 132 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Gm23747-201ENSMUST00000104228 131 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Gm14296-202ENSMUST00000108931 750 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Gm11359-201ENSMUST00000120039 567 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Gm14678-201ENSMUST00000121396 482 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Ufd1P70362 Gm24211-201ENSMUST00000158264 107 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Gm23090-201ENSMUST00000177331 78 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Gm21754-201ENSMUST00000177550 479 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Gm27317-201ENSMUST00000183533 95 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Mir6346-201ENSMUST00000183982 81 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Gm19694-201ENSMUST00000192364 505 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Gm33866-201ENSMUST00000196911 289 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Gm44393-201ENSMUST00000197418 138 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Ufd1P70362 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Gm43032-201ENSMUST00000197967 3123 ntBASIC1.52□□□□□ -2.17
Ufd1P70362 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ufd1P70362 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
Ufd1P70362 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Ufd1P70362 Gm26015-201ENSMUST00000104402 125 ntBASIC1.51□□□□□ -2.17
Ufd1P70362 Gm6829-201ENSMUST00000119858 360 ntBASIC1.51□□□□□ -2.17
Ufd1P70362 Gm24478-201ENSMUST00000157439 158 ntBASIC1.51□□□□□ -2.17
Ufd1P70362 Igkv17-134-201ENSMUST00000168310 348 ntBASIC1.51□□□□□ -2.17
Ufd1P70362 Gm17100-201ENSMUST00000168963 272 ntBASIC1.51□□□□□ -2.17
Ufd1P70362 Mir6351-201ENSMUST00000183826 99 ntBASIC1.51□□□□□ -2.17
Ufd1P70362 Gm37162-201ENSMUST00000191708 551 ntBASIC1.51□□□□□ -2.17
Ufd1P70362 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.51□□□□□ -2.17
Ufd1P70362 Gm6796-201ENSMUST00000211919 243 ntBASIC1.51□□□□□ -2.17
Ufd1P70362 Mir127-201ENSMUST00000093568 70 ntBASIC1.51□□□□□ -2.17
Ufd1P70362 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC1.51□□□□□ -2.17
Ufd1P70362 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.51□□□□□ -2.17
Ufd1P70362 Gm24982-201ENSMUST00000104456 132 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms