Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.6□□□□□ -2.31
Cux1P53564 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Cux1P53564 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.6□□□□□ -2.31
Cux1P53564 Gm14359-201ENSMUST00000118883 424 ntBASIC0.59□□□□□ -2.31
Cux1P53564 Gm15274-201ENSMUST00000131442 291 ntBASIC0.59□□□□□ -2.31
Cux1P53564 Gm21979-201ENSMUST00000139887 291 ntBASIC0.59□□□□□ -2.31
Cux1P53564 Gm9498-201ENSMUST00000140849 291 ntBASIC0.59□□□□□ -2.31
Cux1P53564 Gm14368-201ENSMUST00000145305 415 ntBASIC0.59□□□□□ -2.31
Cux1P53564 Gm15259-201ENSMUST00000151262 291 ntBASIC0.59□□□□□ -2.31
Cux1P53564 Gm2829-201ENSMUST00000213121 499 ntBASIC0.59□□□□□ -2.31
Cux1P53564 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.59□□□□□ -2.31
Cux1P53564 Mir29b-2-201ENSMUST00000083478 81 ntBASIC0.59□□□□□ -2.31
Cux1P53564 Gm24494-201ENSMUST00000083804 81 ntBASIC0.59□□□□□ -2.31
Cux1P53564 Gm42718-201ENSMUST00000197319 2681 ntBASIC0.59□□□□□ -2.32
Cux1P53564 Gm15177-201ENSMUST00000120491 577 ntBASIC0.59□□□□□ -2.32
Cux1P53564 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.59□□□□□ -2.32
Cux1P53564 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.59□□□□□ -2.32
Cux1P53564 Gm25718-201ENSMUST00000158632 118 ntBASIC0.59□□□□□ -2.32
Cux1P53564 Gm20438-201ENSMUST00000174441 329 ntBASIC0.59□□□□□ -2.32
Cux1P53564 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC0.59□□□□□ -2.32
Cux1P53564 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.32
Cux1P53564 Gm22510-201ENSMUST00000179304 79 ntBASIC0.59□□□□□ -2.32
Cux1P53564 Gm26336-201ENSMUST00000179449 79 ntBASIC0.59□□□□□ -2.32
Cux1P53564 Gm26390-201ENSMUST00000179628 79 ntBASIC0.59□□□□□ -2.32
Cux1P53564 Gm27660-201ENSMUST00000184028 208 ntBASIC0.59□□□□□ -2.32
Cux1P53564 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.59□□□□□ -2.32
Cux1P53564 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.59□□□□□ -2.32
Cux1P53564 Gm10297-201ENSMUST00000207136 651 ntBASIC0.59□□□□□ -2.32
Cux1P53564 Gm21089-201ENSMUST00000215843 325 ntBASIC0.59□□□□□ -2.32
Cux1P53564 AC163660.3-201ENSMUST00000224253 1563 ntBASIC0.58□□□□□ -2.32
Cux1P53564 Gm25059-201ENSMUST00000157367 117 ntBASIC0.58□□□□□ -2.32
Cux1P53564 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.58□□□□□ -2.32
Cux1P53564 Gm37599-201ENSMUST00000193067 489 ntBASIC0.58□□□□□ -2.32
Cux1P53564 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC0.58□□□□□ -2.32
Cux1P53564 Gm45878-201ENSMUST00000211839 241 ntBASIC0.58□□□□□ -2.32
Cux1P53564 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.58□□□□□ -2.32
Cux1P53564 Snord1a-201ENSMUST00000083160 74 ntBASIC0.58□□□□□ -2.32
Cux1P53564 Gm22759-201ENSMUST00000102276 96 ntBASIC0.57□□□□□ -2.32
Cux1P53564 Gm24588-201ENSMUST00000116696 83 ntBASIC0.57□□□□□ -2.32
Cux1P53564 Gm12449-201ENSMUST00000117572 234 ntBASIC0.57□□□□□ -2.32
Cux1P53564 Gm11358-201ENSMUST00000122310 373 ntBASIC0.57□□□□□ -2.32
Cux1P53564 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC0.57□□□□□ -2.32
Cux1P53564 Gm24480-201ENSMUST00000157442 103 ntBASIC0.57□□□□□ -2.32
Cux1P53564 Gm21815-201ENSMUST00000178213 664 ntBASIC0.57□□□□□ -2.32
Cux1P53564 Gm28409-201ENSMUST00000187064 103 ntBASIC0.57□□□□□ -2.32
Cux1P53564 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.57□□□□□ -2.32
Cux1P53564 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.57□□□□□ -2.32
Cux1P53564 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC0.57□□□□□ -2.32
Cux1P53564 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
Cux1P53564 Gm12881-201ENSMUST00000121191 203 ntBASIC0.56□□□□□ -2.32
Cux1P53564 Gm23538-201ENSMUST00000157535 101 ntBASIC0.56□□□□□ -2.32
Cux1P53564 Gm22447-201ENSMUST00000158155 92 ntBASIC0.56□□□□□ -2.32
Cux1P53564 Gm25949-201ENSMUST00000175333 114 ntBASIC0.56□□□□□ -2.32
Cux1P53564 Gm27676-201ENSMUST00000183669 61 ntBASIC0.56□□□□□ -2.32
Cux1P53564 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.55□□□□□ -2.32
Cux1P53564 Gm12016-201ENSMUST00000119079 681 ntBASIC0.55□□□□□ -2.32
Cux1P53564 Gm23656-201ENSMUST00000122626 112 ntBASIC0.55□□□□□ -2.32
Cux1P53564 Gm25371-201ENSMUST00000158162 101 ntBASIC0.55□□□□□ -2.32
Cux1P53564 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC0.55□□□□□ -2.32
Cux1P53564 Gm29134-201ENSMUST00000186579 126 ntBASIC0.55□□□□□ -2.32
Cux1P53564 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
Cux1P53564 Gm28337-201ENSMUST00000190425 666 ntBASIC0.55□□□□□ -2.32
Cux1P53564 Gm31123-201ENSMUST00000192094 666 ntBASIC0.55□□□□□ -2.32
Cux1P53564 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC0.55□□□□□ -2.32
Cux1P53564 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC0.55□□□□□ -2.32
Cux1P53564 Gm22620-201ENSMUST00000082700 133 ntBASIC0.55□□□□□ -2.32
Cux1P53564 Mir216a-201ENSMUST00000083605 72 ntBASIC0.55□□□□□ -2.32
Cux1P53564 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
Cux1P53564 Gm24747-201ENSMUST00000157835 87 ntBASIC0.54□□□□□ -2.32
Cux1P53564 Gm25334-201ENSMUST00000158036 110 ntBASIC0.54□□□□□ -2.32
Cux1P53564 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.54□□□□□ -2.32
Cux1P53564 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC0.54□□□□□ -2.32
Cux1P53564 Gm37399-201ENSMUST00000195224 416 ntBASIC0.54□□□□□ -2.32
Cux1P53564 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC0.54□□□□□ -2.32
Cux1P53564 Gm23370-201ENSMUST00000199545 130 ntBASIC0.54□□□□□ -2.32
Cux1P53564 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC0.54□□□□□ -2.32
Cux1P53564 Gm44055-201ENSMUST00000204376 247 ntBASIC0.54□□□□□ -2.32
Cux1P53564 AC112274.2-201ENSMUST00000218436 170 ntBASIC0.54□□□□□ -2.32
Cux1P53564 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
Cux1P53564 Gm23462-201ENSMUST00000083264 104 ntBASIC0.54□□□□□ -2.32
Cux1P53564 Gm23848-201ENSMUST00000083826 106 ntBASIC0.54□□□□□ -2.32
Cux1P53564 AC125532.1-201ENSMUST00000216210 2334 ntBASIC0.54□□□□□ -2.32
Cux1P53564 Gm26147-201ENSMUST00000104479 114 ntBASIC0.54□□□□□ -2.32
Cux1P53564 Gm23754-201ENSMUST00000157576 63 ntBASIC0.54□□□□□ -2.32
Cux1P53564 Gm24137-201ENSMUST00000180055 79 ntBASIC0.54□□□□□ -2.32
Cux1P53564 Gm22391-201ENSMUST00000180356 79 ntBASIC0.54□□□□□ -2.32
Cux1P53564 Mir6904-201ENSMUST00000183443 67 ntBASIC0.54□□□□□ -2.32
Cux1P53564 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.54□□□□□ -2.32
Cux1P53564 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.54□□□□□ -2.32
Cux1P53564 Gm42509-201ENSMUST00000197390 781 ntBASIC0.54□□□□□ -2.32
Cux1P53564 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC0.54□□□□□ -2.32
Cux1P53564 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.54□□□□□ -2.32
Cux1P53564 AC162934.3-201ENSMUST00000223015 841 ntBASIC0.54□□□□□ -2.32
Cux1P53564 AC124569.1-201ENSMUST00000225932 101 ntBASIC0.54□□□□□ -2.32
Cux1P53564 AC154692.1-201ENSMUST00000228314 544 ntBASIC0.54□□□□□ -2.32
Cux1P53564 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.54□□□□□ -2.32
Cux1P53564 Gm3867-201ENSMUST00000086108 279 ntBASIC0.54□□□□□ -2.32
Cux1P53564 Gm23749-201ENSMUST00000104223 131 ntBASIC0.53□□□□□ -2.33
Cux1P53564 Mir883a-201ENSMUST00000104824 76 ntBASIC0.53□□□□□ -2.33
Cux1P53564 Gm24836-201ENSMUST00000122609 108 ntBASIC0.53□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms