Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.11□□□□□ -1.91
Shmt1P50431 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.11□□□□□ -1.91
Shmt1P50431 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Shmt1P50431 Gm26018-201ENSMUST00000104406 128 ntBASIC3.11□□□□□ -1.91
Shmt1P50431 Gm14803-201ENSMUST00000117163 361 ntBASIC3.11□□□□□ -1.91
Shmt1P50431 Gm14402-201ENSMUST00000122217 508 ntBASIC3.11□□□□□ -1.91
Shmt1P50431 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC3.11□□□□□ -1.91
Shmt1P50431 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Shmt1P50431 Gm43220-201ENSMUST00000199299 282 ntBASIC3.11□□□□□ -1.91
Shmt1P50431 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.11□□□□□ -1.91
Shmt1P50431 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.11□□□□□ -1.91
Shmt1P50431 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.11□□□□□ -1.91
Shmt1P50431 AC153646.2-201ENSMUST00000220516 109 ntBASIC3.11□□□□□ -1.91
Shmt1P50431 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Shmt1P50431 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Shmt1P50431 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Shmt1P50431 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.11□□□□□ -1.91
Shmt1P50431 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.11□□□□□ -1.91
Shmt1P50431 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Shmt1P50431 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
Shmt1P50431 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Shmt1P50431 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.1□□□□□ -1.91
Shmt1P50431 Mir466p-201ENSMUST00000103925 89 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Gm23911-201ENSMUST00000104596 134 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Gm23325-201ENSMUST00000157422 129 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Gm23584-201ENSMUST00000157655 129 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Mir1967-201ENSMUST00000157789 82 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Gm22961-201ENSMUST00000157964 106 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Gm16289-201ENSMUST00000162079 183 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Gm17117-201ENSMUST00000163665 299 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Mir3965-201ENSMUST00000175570 69 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Gm25198-201ENSMUST00000178574 110 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Trbv6-201ENSMUST00000193743 276 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Gm43193-201ENSMUST00000197732 441 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Gm43239-201ENSMUST00000200131 201 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Gm36189-201ENSMUST00000204113 523 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Gm44399-201ENSMUST00000205043 226 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Gm5002-201ENSMUST00000207145 223 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.1□□□□□ -1.91
Shmt1P50431 Gm46233-201ENSMUST00000217831 449 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 CT010449.1-201ENSMUST00000220624 153 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 AC122320.1-201ENSMUST00000227233 105 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Gm25081-201ENSMUST00000082534 108 ntBASIC3.1□□□□□ -1.91
Shmt1P50431 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Shmt1P50431 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Shmt1P50431 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
Shmt1P50431 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Shmt1P50431 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Shmt1P50431 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Shmt1P50431 Gm25466-201ENSMUST00000103995 132 ntBASIC3.09□□□□□ -1.91
Shmt1P50431 Gm6829-201ENSMUST00000119858 360 ntBASIC3.09□□□□□ -1.91
Shmt1P50431 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Shmt1P50431 Gm12443-201ENSMUST00000122308 323 ntBASIC3.09□□□□□ -1.91
Shmt1P50431 Gm25107-201ENSMUST00000122472 129 ntBASIC3.09□□□□□ -1.91
Shmt1P50431 Gm24958-201ENSMUST00000158009 97 ntBASIC3.09□□□□□ -1.91
Shmt1P50431 Gm25223-201ENSMUST00000158200 110 ntBASIC3.09□□□□□ -1.91
Shmt1P50431 Gm22989-201ENSMUST00000158313 86 ntBASIC3.09□□□□□ -1.91
Shmt1P50431 Gm26214-201ENSMUST00000158581 107 ntBASIC3.09□□□□□ -1.91
Shmt1P50431 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.09□□□□□ -1.91
Shmt1P50431 Mir6371-201ENSMUST00000184470 111 ntBASIC3.09□□□□□ -1.91
Shmt1P50431 Gm28825-201ENSMUST00000186233 238 ntBASIC3.09□□□□□ -1.91
Shmt1P50431 Gm44223-201ENSMUST00000204854 114 ntBASIC3.09□□□□□ -1.91
Shmt1P50431 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.09□□□□□ -1.91
Shmt1P50431 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.09□□□□□ -1.91
Shmt1P50431 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.09□□□□□ -1.91
Shmt1P50431 Gm10298-201ENSMUST00000074801 265 ntBASIC3.09□□□□□ -1.91
Shmt1P50431 Gm24966-201ENSMUST00000082443 79 ntBASIC3.09□□□□□ -1.91
Shmt1P50431 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
Shmt1P50431 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.09□□□□□ -1.92
Shmt1P50431 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Shmt1P50431 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
Shmt1P50431 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Shmt1P50431 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Shmt1P50431 Gm23990-201ENSMUST00000117031 117 ntBASIC3.08□□□□□ -1.92
Shmt1P50431 Gm22217-201ENSMUST00000157556 313 ntBASIC3.08□□□□□ -1.92
Shmt1P50431 Gm17020-201ENSMUST00000172274 274 ntBASIC3.08□□□□□ -1.92
Shmt1P50431 Gm27285-201ENSMUST00000183875 127 ntBASIC3.08□□□□□ -1.92
Shmt1P50431 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.08□□□□□ -1.92
Shmt1P50431 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.08□□□□□ -1.92
Shmt1P50431 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Shmt1P50431 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Shmt1P50431 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
Shmt1P50431 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Shmt1P50431 Gm22560-201ENSMUST00000157332 120 ntBASIC3.07□□□□□ -1.92
Shmt1P50431 Gm22883-201ENSMUST00000157376 106 ntBASIC3.07□□□□□ -1.92
Shmt1P50431 Gm22141-201ENSMUST00000157403 277 ntBASIC3.07□□□□□ -1.92
Shmt1P50431 Gm22097-201ENSMUST00000157929 278 ntBASIC3.07□□□□□ -1.92
Shmt1P50431 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC3.07□□□□□ -1.92
Shmt1P50431 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.07□□□□□ -1.92
Shmt1P50431 Gm37428-201ENSMUST00000193886 137 ntBASIC3.07□□□□□ -1.92
Shmt1P50431 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.07□□□□□ -1.92
Shmt1P50431 Gm45687-201ENSMUST00000209454 155 ntBASIC3.07□□□□□ -1.92
Shmt1P50431 Gm18000-201ENSMUST00000212153 800 ntBASIC3.07□□□□□ -1.92
Shmt1P50431 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.07□□□□□ -1.92
Shmt1P50431 AC101945.1-201ENSMUST00000226734 466 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms